| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0700 |
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| Symbol | |
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| ID | 6369417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 709791 |
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| End bp | 713288 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642676092 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001950946 |
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| Protein GI | 189423769 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00154056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAC CCACACCATC ACAACGCTGC CCTGTAGCGG CTATAGCACG CCTGGCTGAA
CAACTGCGGC ATGGCGCACA TCCGGCAACC CTGACCGGGC TGGCCGGTTC AGCTCCTGCC
CTGGCAGTTG CTGAACTTTC CCGGCTTCTC CCGCGCCAGA TCGTTGTCAT TGCGGCTGAT
CAGGCAGCCG CCGACGAACT GACCCGTGAG CTGCTGTTTT TCAACGCCGT TAACGTCAGT
CCCTTTCCGG CCTGGGATAC CTGCCCGTTC GAGGCCGCCT CGCCCCACCC CGACATCAGT
GGAGCCCGGC TGGAGACATT ACAACGCCTG CTGCAGGGCA GTCCCTGCAC CGTTGTCGCG
CCGGTGGCTG CCCTGATGCA GCGGATCATC CCCCGCTCCC TTCTGACCGG GGCGTCCTGT
GCCATCAAAC CGGGTGATGA GCCTGACCGC GAAGCCCTGC TGGAAGGGCT GGTTAGGATG
GGTTATACCA ACTGCCCTCT GGTGGAAGAG CGGGGCAGCT TTGCCGTGCG GGGAGGAATT
CTTGACATCT TCCCTCCCAG CTTGCCACGG CCGGTCCGGA TTGAATTCTT TGGCGACACC
GTCGAGACCC TGCGCAGCTT TGATCCGCTG AACCAGCGTT CGCTGGAATC ACTCACCTGC
CTGAACCTGC TGCCTTCACG GGAACTGATA CTTTCCCCGG CAGCGTTACA GGAGTTTATC
CCGCGCCTGA AAGAACGCGC CGACCAGCTT GATATCCCGG CCGACCGGCG TCGCCAGCTG
GTGTCCGAGT TGCAGGGGGC CGGCTATCCC CCTGGCGTCG AATTTCTCCA GCCGCTCTTC
CATCCCGGCC TGCAATCATT TTTCGCCTAC CTGAACAACC CGCTGCTGGT ACTGCAGGAA
CCTGATCTGT TACGCCAAGC AGCCCAACAG CATCAGACGG ACGTTACAAG CGGCGTCCAG
AAAGCAGCGG CCGAAGAACG GCTGCACCCA GCCCCGTACC AGCTGTACCT GACCCAGGAC
GAGTTTTCCC AGCTGCTTGA CCAACAGCAG ACGCTTGCCT TAAGGCGTCT GACTGTTGCC
GGCGAAAGCA GCGCCGATCT GGTACAGATC AGGTCTGAAG ACAACTCGGA TCTGCGGATC
AGCATGGCGC GAGATCAACA GCATCTGCTC GGCCCGCTGG CGGAACGTCT GAAGCAGTGG
CATGCCGCGA ACTGGCGGAC CCTGGTGGTC TGTCACCATC CCAGCCAGGC CGAACGGCTG
CAGGAGCTGC TCACCCCCTA CGGCATCAGC TGCAGCCTCG GCACCACCGA CCCCTTCGGT
CCGGAAGCGC CCTCCGTTCA TACTGACCTG CTGTTGGTAA TCGGTGAACT GTCCCGTGGT
TTCAGGCTGC CGGAATCAAA GCTGGCGGTT ATTGCCGAGG AAGAGCTGTT CGGCAAGCGG
ACCCGCCGCA AGAGTGGTGT CACGGCCCTG CGTACCAAAC AGATCCTGGC CTCGCTGGCA
GAACTCAAAC CGGGTGATGC CATGGTCCAC GTTGATCACG GCATCGGCAT CTACCGCGGT
CTGCAGCACC TGAAGACCGG TGCGGTCGAA GGCGACTTCC TCCTGTTGGA GTATGCGGGC
AACGACAAGC TCTATCTGCC GATTGACCGG CTGGGACTGG TGCAACGCTA TGCTGGCGGC
GAAGGAGCGA CACCAGCACC GGCCAGACTG GGAGGTCCCG GCTGGGAAAA AACTCGCAGC
AAGGCCCGTA AAAACATCGA AGAGCTGGCC GCCGAGCTGC TGGAGGTTTA CGCCAAGCGT
CAGGCCAGCC AGGGCTACAG CTTTTCGCCC CCTGATGAGC TGTTCAGAGA GTTTGAGGCC
ACCTTCCCCT GGGAGGAGAC CCCGGACCAG CTTTCTGCCA TTCAGGATGT GCTGGGCGAC
ATGCAGCACT CCCGCCCGAT GGACCGCCTG GTTTGTGGCG ATGTCGGCTA CGGCAAGACG
GAAGTGGCGC TGCGGGCGGC CTTCAAAGCG GTGCTGGACG GCAAACAGGT TGCCCTGCTG
GTCCCCACCA CCATCCTGGC CCAGCAGCAT TTCGAGACCT TCAGCACGCG CCTGAAGGAT
TACCCGGTTT CCATTGAAAT GCTCTCCCGT TTCCGCAGTG TAAAAGAACA AAAGATCAGC
CTGGAGCGGC TTAAGGAGGG CAAGCTGGAT ATTATCATCG GCACCCACCG CCTGCTGCAG
AAAGATGTCA GCTTCAAGGA CCTGGGGCTA TTGATCGTGG ACGAAGAACA GCGTTTCGGG
GTCAAGGACA AGGAACGGCT CAAGCAGTAC CGGGCCAGCG TTGATATCAT GACCCTGACC
GCCACGCCGA TCCCACGCAC CCTGCACCTC TCCATGCTGG GCATCCGCGA CCTCTCGATC
ATCGACACCC CGCCGGTTGA CCGCCAGGCG ATCAAGACCG TGGTGGCACG GGATACCGAT
GACCTGATCA GGGATGCCAT CACCCGTGAG CTGGAGCGGG GTGGCCAGGT CTTTTATGTC
CATAACCGGG CCCACTCCAT CGGCATTGTG GCAGAGCGGT TGCGGCAACT GGTACCCCAG
GCTCGGATCA GTGTGGCCCA CGGCCAGATG GAGGAAAAAG AACTGGAAAA GGTAATGCTC
ACCTTCATGC ATGGCCAGAG CGACCTGCTG TTGACGACAA CGATCATCGA ATCCGGGCTT
GATATTCCCC GTGCCAACAC CATGCTGGTG GACCGGGCCG ACACCTTCGG ACTGTCGCAG
CTCTACCAGC TGAGGGGCCG GATCGGCCGT TCCACGGTCA AAAGCTACGC CTACCTGCTG
ATCCCCGGGC AGGGCAGCAT TACTCAGGAC GCACGGGAAC GTTTGAAGAT CATACAGGAC
ATTTCCGAGC TGGGGGCCGG CTTCAGAATC GCCACCCACG ACCTTGAACT GCGCGGGGCC
GGTGACATGC TGGGACCGCG CCAGTCCGGC ACCGTTGCTG ACATCGGCTT TGAGCTGTAC
ACCCAGATGC TGGAAGAGGC GATCGCCGGA CTAAAGGGCG AAGACCTTGA GGAGCGCTGT
GAACCGGAGA TTAATCTGGC GATTGCCGCC TTTATCCCTG AAACCTACAT CCCGGATACC
AACCAGCGGC TGGTCTTGTA CAAGCGCCTG GTACAGGCCG ATTCAAATGA CGATGTGGCA
GAGGTGGTCA GCGAGATGCA TGATCGCTAT GGCCGTCCTC CGCTGGCGGC CCAGACCCTG
GCCCGGATCA TGGAGCTGCG CATCAGACTC AAACAGCTTA AGATTCTAAA GGTTGACGCC
GACGGCAAGC GCCTCTGCCT GGCTTTTCAC CCCAGAACCG CTGTCAGCCC GGAGACCCTG
ATCAACCTGA TCCGTACTGC ACCGGCCATC TACCAGTTTA CTCCGGACCA CCGCCTCCTA
GTAACCTTAC CGGTGAACAG CTCAAACAAC GATACCCTTG AGGCCCTGGC TTCCGCACTC
ACACTGCTTG GCGCCTGA
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| Protein sequence | MPEPTPSQRC PVAAIARLAE QLRHGAHPAT LTGLAGSAPA LAVAELSRLL PRQIVVIAAD
QAAADELTRE LLFFNAVNVS PFPAWDTCPF EAASPHPDIS GARLETLQRL LQGSPCTVVA
PVAALMQRII PRSLLTGASC AIKPGDEPDR EALLEGLVRM GYTNCPLVEE RGSFAVRGGI
LDIFPPSLPR PVRIEFFGDT VETLRSFDPL NQRSLESLTC LNLLPSRELI LSPAALQEFI
PRLKERADQL DIPADRRRQL VSELQGAGYP PGVEFLQPLF HPGLQSFFAY LNNPLLVLQE
PDLLRQAAQQ HQTDVTSGVQ KAAAEERLHP APYQLYLTQD EFSQLLDQQQ TLALRRLTVA
GESSADLVQI RSEDNSDLRI SMARDQQHLL GPLAERLKQW HAANWRTLVV CHHPSQAERL
QELLTPYGIS CSLGTTDPFG PEAPSVHTDL LLVIGELSRG FRLPESKLAV IAEEELFGKR
TRRKSGVTAL RTKQILASLA ELKPGDAMVH VDHGIGIYRG LQHLKTGAVE GDFLLLEYAG
NDKLYLPIDR LGLVQRYAGG EGATPAPARL GGPGWEKTRS KARKNIEELA AELLEVYAKR
QASQGYSFSP PDELFREFEA TFPWEETPDQ LSAIQDVLGD MQHSRPMDRL VCGDVGYGKT
EVALRAAFKA VLDGKQVALL VPTTILAQQH FETFSTRLKD YPVSIEMLSR FRSVKEQKIS
LERLKEGKLD IIIGTHRLLQ KDVSFKDLGL LIVDEEQRFG VKDKERLKQY RASVDIMTLT
ATPIPRTLHL SMLGIRDLSI IDTPPVDRQA IKTVVARDTD DLIRDAITRE LERGGQVFYV
HNRAHSIGIV AERLRQLVPQ ARISVAHGQM EEKELEKVML TFMHGQSDLL LTTTIIESGL
DIPRANTMLV DRADTFGLSQ LYQLRGRIGR STVKSYAYLL IPGQGSITQD ARERLKIIQD
ISELGAGFRI ATHDLELRGA GDMLGPRQSG TVADIGFELY TQMLEEAIAG LKGEDLEERC
EPEINLAIAA FIPETYIPDT NQRLVLYKRL VQADSNDDVA EVVSEMHDRY GRPPLAAQTL
ARIMELRIRL KQLKILKVDA DGKRLCLAFH PRTAVSPETL INLIRTAPAI YQFTPDHRLL
VTLPVNSSNN DTLEALASAL TLLGA
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