Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0487 |
Symbol | |
ID | 6367158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 463024 |
End bp | 463941 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642675880 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001950735 |
Protein GI | 189423558 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00126012 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGAC AGGAACAGAC CACCATACTG GTTACCGGCG CAAACGGCTT TATCGGCAGG CGTCTGGTGA AAGAGCTGTT GCAGCGGGGC TACCGGGTAC GCTGCATGGT ACGCCGACCT TCAGATCTGC CTGCTGAGGT TGAACAGATC CAGGCTGATC TGCTGCAACC TGACAGCCTG CCTGCTGCCC TGAACGGGAT AGATACGGTC TACTACCTGG TGCATTCAAT GGGACAGAGC AAAGGTGATT TTGCTGAGCA GGACCGTCTG GCAGCCCGTA ACTTTGTTGC CAGCGCAGAT CTGGCCGGCG TCAAACGGGT CATCTATCTG GGCGGGTTGG GCGAGACCGG CGACAACCTT TCCCACCACC TGGCCAGCCG TCTTGAGGTG GCCCATATCC TGCAAACCGG CTGTTTCAGC ACCACCTTCC TGCGGGCTGC CGTGATCATC GGATTTGGCG GTTCATCCTA CGAGATGGTG CACAGTCTGG TGAAACGGCT GCCGGTCATG ATCACCCCCC GCTGGGTCAG CACCCGCAAC CAGCCGATCG CCGTGGCTGA TGTGATTGCC TATCTGGCCG GTTGTCTGGA AGAACCCAAA ACCGCCGGCG GTACCTTTGA TATCGGCGGT CCCGAGATCA TGACCTACAA GGAGATGATG GAGCGGTTTG CGGTGCTGGA AGGCAAACGG CTCTGGATCA TTCCGGTGCC GGTGTTGACG CCAAAGCTCT CTTCCTACTG GGTGGGGTTG GTAACACCGG TCAAGCCGGC CATTGCCATT GCCCTGATTG AAGGACTGAA GAATGAAGTA ATCTGCCGGG ACACCCGGAT CCGGGAATTG CTGCCGATCC GGCTGACCCC CTACGACGAC GCCATACGAA CGGCCCTGGC CGAACAACAT GCAGGAGGTT CTTTATGA
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Protein sequence | MIRQEQTTIL VTGANGFIGR RLVKELLQRG YRVRCMVRRP SDLPAEVEQI QADLLQPDSL PAALNGIDTV YYLVHSMGQS KGDFAEQDRL AARNFVASAD LAGVKRVIYL GGLGETGDNL SHHLASRLEV AHILQTGCFS TTFLRAAVII GFGGSSYEMV HSLVKRLPVM ITPRWVSTRN QPIAVADVIA YLAGCLEEPK TAGGTFDIGG PEIMTYKEMM ERFAVLEGKR LWIIPVPVLT PKLSSYWVGL VTPVKPAIAI ALIEGLKNEV ICRDTRIREL LPIRLTPYDD AIRTALAEQH AGGSL
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