Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0394 |
Symbol | |
ID | 6366091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 370521 |
End bp | 372479 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642675786 |
Product | ABC transporter related |
Protein accession | YP_001950642 |
Protein GI | 189423465 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAGC CGCTCCTTGA AATAGATGCC GTGGTGCGCC GGTTCTCAAC CGGTGGCCAG CAGGTGGAGG TCCTCAAGGG GATCGACCTG ACCATCCATA GCGGAGAGAT GGTGGCCATT ATCGGTGCCT CCGGTTCGGG CAAGTCCACC CTGATGAATA TCCTGGGCTG CCTGGACCGT CCCAGTGAGG GGAGCTACCG GATCGACGGC CGGGAGACCG GCAGCCTGTC AAATGACGAA TTGGCCAGTC TCAGGCGTGA CTACTTCGGA TTTATCTTCC AGCGCTACCA CCTGCTGCCC CACCTGACCG CCATTCAGAA TACCGAGATA CCGGCCATCT ATGCCGGCGC GAACAAGCAT CTCCGGCAGG AACGTGCCAG AAAGATCCTT GAACGGCTTG GCCTGGGAGA CCGGTGCGAT CACCGTCCCA ATCAGCTTTC CGGTGGCCAG CAGCAGCGGG TCAGTATTGC CAGGGCGTTG ATGAACGGCG GTGACGTCAT TCTGGCGGAT GAGCCAACCG GCGCCCTGGA CAGCAAGAGC GGCAAAGAGA TGATGGAGGT GCTGCATGAA CTGCATGCCA GTGGCCATAC CATCATCCTG GTTACCCACG ATCAGCAGGT GGCCGCCCAT GCTGAACGGA TCATCGAGAT CAGTGACGGT GCGATTATCC GCGACCAGGC GAACCCGAAA CGGCAGGCTT CAGTAACTGC CGCACTGGCG GAAAAGGTTG CTGTCAAACA GGCGGCTAAC TTCCTGCAGG CCAACTGGGG CAGATTTGCC GAAGCCTTCA AAATGGCCCT GATCGCCATG CTGTCCCACC GCATGCGGAC CCTGTTGACC ATGCTGGGGA TCATCATCGG CATAACCTCG GTTGTTTCTG TCGTGGCTCT TGGCCAGGGA GCGCAACAAA AGGTCATCAA GGATATCAGC GCCATGGGCA CGAATGTCAT CGACGTCAAC CCCGGCAAGG ACTGGGGGGA TGAAGACGCT GCCGGTATCC AGACCCTTGT GCAATCGGAT CTGGAGGCCC TCAAGGCGCA GGTGTATGTA GACAGCGCCT CGCCCACAAC CGGCGGCAGC CAATTGCTGC GCTACCGCAA CCTGACCGCC AATGCTTCGG TGAATGGCGT CGGTGAACAG TACTTCCGGG TCAAGGGGTA TGAGATTGCC GATGGCATCG CCTTCAGCGC CGCCGACGTC AAACAGCAGG CCCAGGTGGT GGTCATTGAC CAGAATACGC GCAAAAAGTT CTTCAGCAAC CAGGACCCGA TCGGCATGAT TCTGTTTGTC GGCTCGTTGC CCTGCCGGGT CATCGGTATC ACCAAAGTCA AAGACGGCCC CATGGGAAAC AGCTCGAATC TAGAGGTCTG GATACCCTAC ACGGCTGCCA TGAACCGGCT CCTGGGGCAG CAGTATTTCA GCTCGATTAC GGTGCGGGTC AAGGATGGCA TCTCCAACCC GGTTGCAGAA CAGAGTATCA CCAGGCTGGT CACCCAGCGC CATGGCCGCA AGGACTTCTA CACCAACAGC AGCGACAGCA TCATGAAGAC CATCAACAAG ACCACCACCA CGCTGAAGCT GATGATCTCG GCCATTGCCG TGATTTCGCT GATTGTCGGC GGCATCGGCG TCATGAATAT CATGCTGGTA TCGGTCACGG AGCGGACCCA CGAGATCGGC ATCCGGATGG CGGTCGGAGC GCGTCAGGAG GATATCATGC AGCAGTTTCT GATCGAGTCG GTTCTGGTCT GCCTGCTGGG GGGGATGATC GGCATCATCT GTTCCTGGGG CGTGGCAAAG GTGTTCTCGC TGTTCGTAAC CAGTTTTGCC ATGCAGTTTT CGCTCATGTC GATTGTCTCG GCCTTCCTCT GTTCAACCAT GATCGGCGTC ATCTTCGGCT TCCTGCCGGC CCGTAATGCG GCCCGCTTAG ACCCGATCGA AGCACTAGCC AGGGAGTAA
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Protein sequence | MAKPLLEIDA VVRRFSTGGQ QVEVLKGIDL TIHSGEMVAI IGASGSGKST LMNILGCLDR PSEGSYRIDG RETGSLSNDE LASLRRDYFG FIFQRYHLLP HLTAIQNTEI PAIYAGANKH LRQERARKIL ERLGLGDRCD HRPNQLSGGQ QQRVSIARAL MNGGDVILAD EPTGALDSKS GKEMMEVLHE LHASGHTIIL VTHDQQVAAH AERIIEISDG AIIRDQANPK RQASVTAALA EKVAVKQAAN FLQANWGRFA EAFKMALIAM LSHRMRTLLT MLGIIIGITS VVSVVALGQG AQQKVIKDIS AMGTNVIDVN PGKDWGDEDA AGIQTLVQSD LEALKAQVYV DSASPTTGGS QLLRYRNLTA NASVNGVGEQ YFRVKGYEIA DGIAFSAADV KQQAQVVVID QNTRKKFFSN QDPIGMILFV GSLPCRVIGI TKVKDGPMGN SSNLEVWIPY TAAMNRLLGQ QYFSSITVRV KDGISNPVAE QSITRLVTQR HGRKDFYTNS SDSIMKTINK TTTTLKLMIS AIAVISLIVG GIGVMNIMLV SVTERTHEIG IRMAVGARQE DIMQQFLIES VLVCLLGGMI GIICSWGVAK VFSLFVTSFA MQFSLMSIVS AFLCSTMIGV IFGFLPARNA ARLDPIEALA RE
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