| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0298 |
|---|
| Symbol | |
|---|
| ID | 6365963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | - |
|---|
| Start bp | 268959 |
|---|
| End bp | 270206 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642675690 |
|---|
| Product | DNA-cytosine methyltransferase |
|---|
| Protein accession | YP_001950547 |
|---|
| Protein GI | 189423370 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTATT CAGAAGCTCT GGTTCGACTA AAAGAGGCCC GTGGACGTTT TACCCAGAAA
TCTCTTGCAG AGCAGCTTGA TGTATCTATC AAGACTATTG GGCGATGGGA ACGGGAAGAG
ATAAAATGTC CCTCACATAT TGCCCCTGCC TTGAAAGAGC TGCTCCGAAG CAAGAATCAG
ACTGCCGACA ATGCCGACAT GTTCACTTTT ATCGACCTAT TTGCCGGAAT TGGCGGAATC
AGGCTCGGTT TTCAGTCGGC GGGCGGGAGA TGCGTTTTTA CAAGCGAATG GAATGACTGG
TCACAGAAAA CGTATGTAGA AAACTTTGGG AATGAACATG CTATCGTCGG AGACATCGTA
CCATATCCCG CCGAAGACAT TCCAGACCAC GATGTTCTGC TTGCCGGATT TCCATGTCAG
CCTTTTTCAA TAGCCGGTGT CAGCAAGAAA AATGCTTTGG GAAGACCCCA TGGTTTTGAG
TGTACCACAC AGGGCACTCT CTTCTTTGAT GTTGCCCGTA TCATTGCCAC CAAACGCCCA
AAGGCGTTTC TGCTTGAAAA TGTAAAAAAC CTGCTTTCAC ACGACAAAGG TAACACCTTC
AAGGTCATTA TCCAGACCCT TAAAGAAGAA CTTGGTTACG ACGTTCATTT CAGGATCATA
GATGGCAAGA GCTGGGTGCC ACAACATCGG GAACGAATCA TAATTGTCGG GTTCAGGGAA
AAAACCGGCT TCTCTTTTGA CAGTCTGCAG TTGCCGAAAG AAGGTCCGAA GTTATTCAGT
ATCCTTCACC CGGAAGACGG GACTGAACAG GAAGAAACTC CTTTCACGGT AGGTGACAAG
GCAAAGGTTC ACGAAAAATA CATTCTGACA AACAATCTAT GGTCATATCT TCAAGCATAT
GCCGCCAAAC ATAAAGCTGC CGGAAATGGA TTCGGATTCG GTCTTGTCGG AAAGAACGAT
ACCGCCCGAA CTCTTTCAGC TCGTTACTAC AAGGATGGTT CGGAAATCCT TATAGATCGT
GGCAAAGGCA AGAATCCTCG AAGACTAACT CCAAGGGAAT GCGCACGGTT AATGGGGTTC
CCGGACAGTC ACAAGATTAT TGTGTCAGAT ACGCAGGCTT ACCGCCAGTT TGGAAATTCC
GTGATAGTTC CGGTAATGCG AGAAGTTGCA CGGATTATGG CGCCACATGT CATTGACCTT
AAGCAGCAGG AAGAAATGGG TGTTTCGCAA CAGTGGCTAC TTGCCTGA
|
|---|
| Protein sequence | MSYSEALVRL KEARGRFTQK SLAEQLDVSI KTIGRWEREE IKCPSHIAPA LKELLRSKNQ
TADNADMFTF IDLFAGIGGI RLGFQSAGGR CVFTSEWNDW SQKTYVENFG NEHAIVGDIV
PYPAEDIPDH DVLLAGFPCQ PFSIAGVSKK NALGRPHGFE CTTQGTLFFD VARIIATKRP
KAFLLENVKN LLSHDKGNTF KVIIQTLKEE LGYDVHFRII DGKSWVPQHR ERIIIVGFRE
KTGFSFDSLQ LPKEGPKLFS ILHPEDGTEQ EETPFTVGDK AKVHEKYILT NNLWSYLQAY
AAKHKAAGNG FGFGLVGKND TARTLSARYY KDGSEILIDR GKGKNPRRLT PRECARLMGF
PDSHKIIVSD TQAYRQFGNS VIVPVMREVA RIMAPHVIDL KQQEEMGVSQ QWLLA
|
|---|
| |