Gene Glov_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGlov_0172 
Symbol 
ID6366338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter lovleyi SZ 
KingdomBacteria 
Replicon accessionNC_010814 
Strand- 
Start bp163539 
End bp163982 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content55% 
IMG OID642675569 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_001950426 
Protein GI189423249 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.505473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAGG AATTCAAGAC CTTTATCATG AAGGGCAACG TGCTGGACCT GGCGGTTGGT 
GTGATTATCG GCGCTGCCTT TGGCAAGATC GTCAACTCTG CCGTCAACGA CCTGATCATG 
CCGGTGGTGG GCCTGGCCTT GGGCAAGGTT GATTTCAGCA ACCTCTTCAT CAGCCTGAAA 
GGGGGCGAGT ATGCGACTGT TGCAGCAGCC AAGGCGGCCG GTGCACCCAC CCTCAACTAC 
GGTATCTTTC TCAACACAAC CCTGGATTTT CTGATCATGG CGCTGGTGAT CTTCATGATT 
ATCAAGGCCG CCAACAAGGT TCGCAAGACA GAAGAGCCCG CTCCGGCACC GGTACCGCGT 
GAGTGCCCTT TTTGTAAATC AGCGGTGCAT GACGAAGCAA GCCGTTGCCC TCACTGCACC 
TCTCAGCTTA ATGCAACAGC CTGA
 
Protein sequence
MLQEFKTFIM KGNVLDLAVG VIIGAAFGKI VNSAVNDLIM PVVGLALGKV DFSNLFISLK 
GGEYATVAAA KAAGAPTLNY GIFLNTTLDF LIMALVIFMI IKAANKVRKT EEPAPAPVPR 
ECPFCKSAVH DEASRCPHCT SQLNATA