Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_0056 |
Symbol | |
ID | 6367093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | - |
Start bp | 58353 |
End bp | 59588 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642675457 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001950314 |
Protein GI | 189423137 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCACT CCTTTAACAA CCTGCGCTGG CGCCTGTTCT TCACCCTGGC GCTGATCTAC ATCCTGGTCT ACTTCTACCG TGTCTCACTG GCTGTGGTCT CGGCCGATGT CAGCCGAGAC CTGGCCCTGA CCCCGCAACA ACTGGGCAGC CTGGCCGGAG TGCTGTTCTA CGTCTATGCC GTGGCCCAGA TCCCGCTGGG ACCGCTGATC GACCGAGTCG GTCCCCGGCT GGTGATCTCC GGCTGCGGCC TTTTAACCAC CCTGGGCGGT CTGTTGTTTT CCCAGGCCGG ATCACTGACC GCCGCCATGG CAGGCCGGGT GTTGATCGGC ATCGGCACGG CAGCGGTGCT GATGGCCAGC TTTACCATCT TCAGCCATTG GTATACCCGC CAGGAGTTTG CCCGGATCAC CGGCCTGATG ATCGCCGTCG GCAACCTGGG CAATCTGGCA GGAACCGCCC CGCTGGCCAT GGCGGTCGGT CTGATGGGAT GGCGTTCTTC GTTTCTGCTG ATCGCCCTGC TGCAGGGGGT GGTAACCGTA CTGATCTTCC TGAAGGTGCA GGACCGGCCG GCACGCCCCC TTGAAACGGT AGCGCCTGAA CAGCTGCAAC CGCCGGGCAT GCTGGCAGCC TGGGGAACCA TCGCCCGCAA CCGCTCCTTC TGGCTGCTGG CGGCCATCGC CTTCTGCTGG TACGGCAACT ACCTGGCGGT ACAGGGGTTG TGGGGCGGCC CGTTTCTGAT GCAGCTGATC GGTTTGTCGC GGGAAGGGGC GGGCCAGATG CTGATGTGGA CCTCGGTCGG CTTTATCATC GGTTCGCCGT TGATGGACCG GATAGCCCGC AGCCTGTTTC ACTCCTACAG CCGGACCCTG CTGGCCGGGC AGCTCTGCCT GACCGGGCTG ATGACCGGCT TCATGGGCTG GTTGCCGCTG CTGCCCCACT GGGGGCTGGT GCTCTATTTT CTGGGGATCG GACTGACAGT CTCCAGCGGG GTGATGATCT ATCCGATCAT TCGGGCCATG GTGCCGGTCA GTATGGTGGG GACCGGCCTG ACCTCGCTGA ATTTCTTTGT GTTGATGGGG GCGGCCACCA CCCAGCAGGG GATGGGAGTG ATCATTGCCC GCTGCGGCGG TTACAGCCCG GAAGGTTTCC GGGCTGCCTT CAGTGTGCCG GTGGGAGGGT TGCTGCTGAC CAGCCTGCTG TTCCTGTTTG CCCGCAACTA CCCTGCCGGT GAGTAG
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Protein sequence | MPHSFNNLRW RLFFTLALIY ILVYFYRVSL AVVSADVSRD LALTPQQLGS LAGVLFYVYA VAQIPLGPLI DRVGPRLVIS GCGLLTTLGG LLFSQAGSLT AAMAGRVLIG IGTAAVLMAS FTIFSHWYTR QEFARITGLM IAVGNLGNLA GTAPLAMAVG LMGWRSSFLL IALLQGVVTV LIFLKVQDRP ARPLETVAPE QLQPPGMLAA WGTIARNRSF WLLAAIAFCW YGNYLAVQGL WGGPFLMQLI GLSREGAGQM LMWTSVGFII GSPLMDRIAR SLFHSYSRTL LAGQLCLTGL MTGFMGWLPL LPHWGLVLYF LGIGLTVSSG VMIYPIIRAM VPVSMVGTGL TSLNFFVLMG AATTQQGMGV IIARCGGYSP EGFRAAFSVP VGGLLLTSLL FLFARNYPAG E
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