| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_0054 |
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| Symbol | |
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| ID | 6367276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter lovleyi SZ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010814 |
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| Strand | - |
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| Start bp | 54819 |
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| End bp | 57725 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642675455 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001950312 |
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| Protein GI | 189423135 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.317983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATCCC TGCTTCTGTT ACTGATAGTG GCCCTGTTAA CCGGTCCGGT CCCTGCCCTG
GCTGCCAGTT ATGAGGAGGC CAGCGACCTG CTCATGGAGC GCCGCTACGC CCAGAAACTG
CTGGCTGCCG GACGTTATGA AGAGGCATTG AAGCAGGCGC GCCAGGTGCT GGCAAACGCC
CGGAGGCTCT TTGGGACAGA GCACCGTGAT ACGGCCATGA GCCTTGATAC CGTCGCCGCA
ATCCTGCGCA AGATGGGCAG ATTTGATGAA TCTGAGCGAT ATTTTGTACA GGCACTGCAG
ATAGTCCGCG CACATCGCCA GGAGGCCCCG GCTGATTATG CCGCAGCCCT GCAAAACCTG
GCCGGGCTCT ACCGCGAAAC CGGCCGCTAC ACTGAATCGG AACAGCTGTA TCGTGAGGCG
ATTGAGACCC TGAAAACAGT GGAGCAAAAG GATGATGAGG CGCTGATCTC CGTCTATGGC
AACCTTGCCG TGCTCTATCA GAATCAGGGG CGTTACGCCG AGGCAGAGCC GCTGCTGAAG
GCTGAGTATG AGTGGGCGCT GAAGGCTGCC CAGCCTGACG CGCTCTCCCT CAGGATGCAT
CTCTCAATGG ACCGGCAACG CCTGTTTCTG GCGGACCGGA TGTCCAGTCT GGCCGGGCTG
TACCTCAAGA TGCGGCGCAC CCGGGAGGCA ACAGAGCTGA CCGCAGCGGC GCTGGAGATC
AAACGTCAGA TTCTGAAGCC TGATGATCCC CGGCTTATCC GCGAAATGAA CAATCTGGGG
ATGATCTACC GCGACAACGG CAGACCGCAG GAGGCAGAGG GGCTGCTGCA GCAGGCCGTG
ACCTCTGCCC GCAACGTGTA CGGGAACCGA CACCCTGAGC TGGCGGTGTA TCTGGATAAT
CTGGCACTGC TGCTGCAACG GAAAGAGGCC TACGCACAGG CAGAAAAACT GCAGCAAGAG
GCGATCAGCA TCAGTGCACA CAGCCTGGGA GGCAGCCATC CCACCACCCT GATGCAGCGC
AACAACCTGG CGGTCAACTA CCTGATGCAG GAACGCTATG CCGCTGCCGA ACAACTGTTG
CATGATATTC TGACGGACAG CCTGGCAGGG CCGACCGGTA CGCATTATCC TGAGGTTGCC
ACACGGATGA CCAACCTGGC CGATGCCCTA CGGCTGCAGG GCAAACACCT TGAGGCCCAC
CGGCTGCAGA CCGAGGCGCT CAGAATCAAG GAACGAAAGC GGGATGATCT GTTCCAATTG
CTGACCGAAC AGCAGAAGCT GCAGTACCTG CAGGAGGAAA TGGCGTTTGT CAGACTGCAT
CTGGCCCATA CCCGGCAGGT GCTGGCCCAG GACCCCGGCG CTGCGGCTAC TGCCCTGGAC
GTCTGGTTGC GCTGGAAGGG GATTGTGATG GAGTCCCAGG GGCGCTATCT GGATGCGCTC
TACAGGACCG ATGATCCTGC CTTGAAGCAG CAGTTTGAGG AGTTGGTAGC TGTTCGCAGG
CAATTGGCAG GCCTGCAGCT GGTGCAGCCT GCTCCCCAGT CAGCCCAGAG CCACGCCACC
AGAATCGAGC TGCTCGAGTA TCGCAAAGAA CAGCTGGAGA CAGATCTGAC CAAACGCAGC
GCTGTCTATG CCAAGGCCGG TACATCACAG CGATTTACCA GCAATGAGCT GCGCAAGTTA
CTGCCAAAGG GTGCCGCCTA TATTGATTTT GTGCTGGTTG AGGATTGGCA TTTCCAGCCG
CTGGAGGTGC GGGGCCTGCG CTATCTTGCC TTTATTGTCA GCAATCAACC GGGTGCGACG
GTACAGATGC TGGATCTGGG ACCTTCAGGC AGTATTAATC AGGTGATTAC TGACTACCGT
CGCCAGATTG CCGCACAGGC CGGTGGCGGC AAGGCAGATA CCTCGCGGCT TGTGGCTGTT
GCTGCCGAAC TCCATGCCAG AATTGTGGCA CCATTGCTCC CTTATCTACA GGGGGTTTCA
TCGCTCATCA TCAGCCCTGA TGCCGGTCTG CACCTGCTGC CGTTTGAGGT GCTGCGTGCT
AAAGGGAAGC CCTACCTGCT GGAACAGTAT GCCATCAGCT ATGTTGGCTC AGGCCGGGAT
ATGGCCCGCT TTGGCACCTC TGTAGCCAGC TCGGGAAAGG CGTTGCTGTT TGCTGATCCT
GATTACGATC TACCGTTGCA TACCGGTGAA GCTCGACCTC ACGGTGAACT GCTTGCTCAG
CTTACGTCCC TGCAGTTCAG CAGGCTGCCC GATACCAAGG TGGAGACCGA TGCCATTGCC
GGGCTGCTCA GGCATGGGAC ACAGATCAAG GTTCAAAACC TTGCTGGTCG CCAGGCCCTT
GAATCCACCC TGCTTGCCCA ATCACAGCCA AGAATACTGC ACCTGGCAAC CCACGGTTTT
TTCCTGCAGG ATGAGACAAG CGGTGGCAGT GAGACCCGAG GCCTTAAGGC TGTGCAGCTG
ATCAAACCAG CCAGTGGCGC AGCTCACACA CAGCTGACCA ACCCTATGCT CCGTTCCGGC
ATTGCGCTGG CCGGTGTGAA CGGCGCACTG GCCCGGGGCC GGGATGACGG GCTGGTGACG
GCTGAAAAGA TTCTGGGGAT GCGCCTGCTG GGGACTGATC TGGTCACCCT CTCAGCCTGT
GAAACCGGGG TGGGGGATAT CAAGGCCGGT GAAGGGGTCT TCGGGCTAAA ACGGGCCTTT
ATTCTGGCTG GTGCCAGAAC CGTGGTCTTA AGCCTCTGGT CAGTGCCAAG CCGTGAGACA
ACCGAGCTGA TGACTGAATT CTATCGGCTG ATGGCCTCTG GAACCCCCAA GGCTGCTGCC
CTGCGCCAGG CCCAGCGGAC CATGCTCGGG AAATATCCCC ACCCCTTCTA CTGGGGCGCC
TTTCAGCTGG TGGGCAGCCC TGACTAA
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| Protein sequence | MRSLLLLLIV ALLTGPVPAL AASYEEASDL LMERRYAQKL LAAGRYEEAL KQARQVLANA
RRLFGTEHRD TAMSLDTVAA ILRKMGRFDE SERYFVQALQ IVRAHRQEAP ADYAAALQNL
AGLYRETGRY TESEQLYREA IETLKTVEQK DDEALISVYG NLAVLYQNQG RYAEAEPLLK
AEYEWALKAA QPDALSLRMH LSMDRQRLFL ADRMSSLAGL YLKMRRTREA TELTAAALEI
KRQILKPDDP RLIREMNNLG MIYRDNGRPQ EAEGLLQQAV TSARNVYGNR HPELAVYLDN
LALLLQRKEA YAQAEKLQQE AISISAHSLG GSHPTTLMQR NNLAVNYLMQ ERYAAAEQLL
HDILTDSLAG PTGTHYPEVA TRMTNLADAL RLQGKHLEAH RLQTEALRIK ERKRDDLFQL
LTEQQKLQYL QEEMAFVRLH LAHTRQVLAQ DPGAAATALD VWLRWKGIVM ESQGRYLDAL
YRTDDPALKQ QFEELVAVRR QLAGLQLVQP APQSAQSHAT RIELLEYRKE QLETDLTKRS
AVYAKAGTSQ RFTSNELRKL LPKGAAYIDF VLVEDWHFQP LEVRGLRYLA FIVSNQPGAT
VQMLDLGPSG SINQVITDYR RQIAAQAGGG KADTSRLVAV AAELHARIVA PLLPYLQGVS
SLIISPDAGL HLLPFEVLRA KGKPYLLEQY AISYVGSGRD MARFGTSVAS SGKALLFADP
DYDLPLHTGE ARPHGELLAQ LTSLQFSRLP DTKVETDAIA GLLRHGTQIK VQNLAGRQAL
ESTLLAQSQP RILHLATHGF FLQDETSGGS ETRGLKAVQL IKPASGAAHT QLTNPMLRSG
IALAGVNGAL ARGRDDGLVT AEKILGMRLL GTDLVTLSAC ETGVGDIKAG EGVFGLKRAF
ILAGARTVVL SLWSVPSRET TELMTEFYRL MASGTPKAAA LRQAQRTMLG KYPHPFYWGA
FQLVGSPD
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