Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3567 |
Symbol | |
ID | 6973373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011367 |
Strand | - |
Start bp | 14697 |
End bp | 17000 |
Gene Length | 2304 bp |
Protein Length | 767 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643393536 |
Product | ABC transporter related |
Protein accession | YP_002278354 |
Protein GI | 209542173 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATTTGA CCGACCCTAT CCTTGCTGTT CCCGGCCAAG ATCAATCACT GAATGGAATA GGTGGTCGAG ATGAAGGTGC TTTTGAAAAC CGGCAAGGCG CGGATACTCC GGCTCAAATA AGACTCCGGG CGGTTGTTGT TGCCAGCCGC TATCATGGGT TGCAACTCGA TCCGATGGAT TTCAGGCCGG AACCGAACGA AACGTCGCCC TCTCCAGCGA GTTTGGCGCG ATGGCTCAAT GATTCCGGGG CCGTGGCAAA AGGTATGCGG ATTGAATGGC GTCATCTTGT AAAGATGCGT AATTCACCGC CAATTGTACT GATGTTTCGA GACGGCTCTG CGGCACTAAT GGTCAATGCG GAGCCTATTC GTGGTGTCGT CTTGCTGCGC GACCCAATGG CGGAGGAAAC CGAAGCGCCC GTTTCCGTAG ATGAAATGCG GCTATCGGAA ATCTGGAACG GCGACATCCT CCTGGTCAAG CGTCAGCAAG ACCAGAGCGA AGCCGATGCC CCGATCAATA TGGCCTGGCT GGCCAGGATG GTGCTCCGAG AAAAAAAGTC GCTCCGTGAT ATTACTTTTG CCTCTCTGAC CCTGAGTGTC CTGCAAATCT TTCCGCCATT GGCGGTCATG CAGGTCATTG ACCGTGTGGT GAATAACCGG TCGATGGCGA CGCTTGTGTC CATTGCAGCC ATTGTTCTGA TGCTTTCGAT CTACGAGATA CTGCTGTCCT TCGGTCGGCG TGAACTAACG CTCATCCTGA CGACACGGAT CGACGCCAGA ATATCGCTTC ATATCTTCAA TCGCCTCTTG GCGCTGCCGC TCGAATATTT TGAACAGCAG CAGGCTGGGA ACATCATCGG CCGTGTCATG GCGATTTATA AGGTCCGTGA CTTCATGACC GGACGACTGA TGTCTACCTT CCTCGATATG TTCACACTTG TTGTTATTTT GCCCTTTCTC TTCTACCTGA GTTCGACTCT CGCGTGGATG ACTGTGGCGA CCGCTGGGAT GATCGGTGTA GTGATTGCCG TGTTCATGCG TCCTGTCGGT CGTATCTATG GCTGGCTTGT AAAGGCCGAG GCAGAACGAT CCTCGGTCAT GTACGAAACG GTGGCCGGTA TCCGGACGGT CAAGACACTG GCACTGGAGC CAGCCCGTAA ACAGGAATGG GACCGTCGGA CGGCCGACGT CGTTCGTTGG AAGCTGTCCG TCGGACGCAT GGCCAACTGG CCGACTACGT TGACCATGCC GATGGAGATG TTCATCAATC GCGGCATCAT CCTCGTCGGA GCCTATCTCG CATTGACGAA CGCCAGCACC GTCGGCGTCG GTGCGTTGGT TGCTTTCATG ATGCTCGGGG GGCGCGTCGC AACGCCGTTG GTGGGCGTGG CCCGATTGCT CGACGACCTG AACGAAGTGA TGACTTCGCT TGCCGAAGCA GGGTCTGTGC TTAACCAGGC AACCGAGACG AAGGCGCTGA CCGAAGGGAT GCGTCCACGC ATCAAGGGGG CACTGTCGTT CAATGCCGTG AATTTTACCT ATCCTGGCTC GACGACCAAG GCGCTCAACG ATGTCAGTTT CTCGATTCCC GCCGGAACGA TGCTGGGTCT GGTCGGTCGT TCCGGCTCGG GGAAGTCGAC GATTACCCGC CTGCTACAGG GTGTCAGCCG CTCCTATGAA GGGTATTTGA AGCTGGATGG CATCGATCTG CGTGAAATCA ATCTGACCCA TTTGCGTCGC TCCCTGGGGG TGGTGTTACA GGATAATTTC CTGTTCCGTG GTTCTATACG TGACAACATC ATCGCTGGCC GCCCAGGGCT GACCATTGAT GACGTTGTGC GTGCCGCGCG GCTGGCCGGC GCCGAGGAAT TTATCGAGCG GCTCCCCGCA GGCTATGATA CCTGGATAGA GGAAGGATCG ACCAATATCT CAGGCGGTCA GCGCCAGCGT CTCGCCATTG CCCGCGCCCT GATTTCAGAT CCGAAACTGC TGATTCTTGA TGAGGCGACG TCCGCCCTCG ATCCGGAGAG CGAAGCCCTC GTCAGTGCCA ATATCGAGCA GATGGGCAAG GGGCGCACTA TGATCATCGT CTCTCACCGT CTTTCATCAT TGGTGAATTG CGATCGGATC TTGGTCATGG AGCACGGACG GGTCGCGGAT ATTGGACCAC ATGAAGTATT GTTGGAGCGC TGTGCTACCT ATCGTGCGCT ATGGATGCAG CAAAACAGAC ATATGGAGCG GCACGCCCAC AAAAATCGCA TAGATGAACC GGGTCTGAAA TCTTCAGACT CACAGGGAGG CTGA
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Protein sequence | MDLTDPILAV PGQDQSLNGI GGRDEGAFEN RQGADTPAQI RLRAVVVASR YHGLQLDPMD FRPEPNETSP SPASLARWLN DSGAVAKGMR IEWRHLVKMR NSPPIVLMFR DGSAALMVNA EPIRGVVLLR DPMAEETEAP VSVDEMRLSE IWNGDILLVK RQQDQSEADA PINMAWLARM VLREKKSLRD ITFASLTLSV LQIFPPLAVM QVIDRVVNNR SMATLVSIAA IVLMLSIYEI LLSFGRRELT LILTTRIDAR ISLHIFNRLL ALPLEYFEQQ QAGNIIGRVM AIYKVRDFMT GRLMSTFLDM FTLVVILPFL FYLSSTLAWM TVATAGMIGV VIAVFMRPVG RIYGWLVKAE AERSSVMYET VAGIRTVKTL ALEPARKQEW DRRTADVVRW KLSVGRMANW PTTLTMPMEM FINRGIILVG AYLALTNAST VGVGALVAFM MLGGRVATPL VGVARLLDDL NEVMTSLAEA GSVLNQATET KALTEGMRPR IKGALSFNAV NFTYPGSTTK ALNDVSFSIP AGTMLGLVGR SGSGKSTITR LLQGVSRSYE GYLKLDGIDL REINLTHLRR SLGVVLQDNF LFRGSIRDNI IAGRPGLTID DVVRAARLAG AEEFIERLPA GYDTWIEEGS TNISGGQRQR LAIARALISD PKLLILDEAT SALDPESEAL VSANIEQMGK GRTMIIVSHR LSSLVNCDRI LVMEHGRVAD IGPHEVLLER CATYRALWMQ QNRHMERHAH KNRIDEPGLK SSDSQGG
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