Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3346 |
Symbol | dnaE |
ID | 6976789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3660497 |
End bp | 3663925 |
Gene Length | 3429 bp |
Protein Length | 1142 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643392860 |
Product | DNA polymerase III subunit alpha |
Protein accession | YP_002277688 |
Protein GI | 209545459 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.103995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCACG CCGATTTCGT CCATCTTCGC GTTCATTCCG CCTATTCGCT CAGCCAGGGG GCGATCCGCA TCCCCGAGAT CGCGTCCCTG GCGCAGGACA TGCGCATGCC GGCGGTGGCG ATCACCGATA CCGGCAACCT GTTCGGGGCG CTGGAATTCT CGCAATATTG CTCGGGCAAG GGGGTGCAGC CGATCATCGG CTGTCAGGTC GGCCTGCCGC CGCGCAACGA CAAGCCCGGC GCGCCGGCCG AGCCCGTCGT CCTGCTGGCG CAGGACGAAA CCGGGCTGAT GAACCTGCAA TACCTGTCTT CGCAGGGGTT CCTGACGGGC GACACCGCCG AGCCGACGGT GACGCTGGAC GTGCTGTGCG AGCGGGCGGA GGGACTGATC CTGCTGACCG GCGGCACGCG CGGCCCGCTG TTCCGCATGC TGGCCGACGG GCAGCAGGAC GAGGTCGCGC AGTGGCTGGA ACGGCTGCAC GCCGCCTTCG GAGACCGGCT GGCGGTCGAA CTGCACCGGC ACGGGCTGCC GGTCGAAAAG GCGGTCGAAC CCGGCATGAT CGCGCTGGCC GACCGGATGG GCCTGCCGCT GGTCGCGACC AACGAATGCT TCTTCCCCCG GCCGGAGATG TACGAGGCGC ATGACGCGCT GCTGTGCATC GCCCAGGGCC GCACGATGGC CGAGCGCGAC CGCTGGCGGG TCACGCCGGA ACATTGGTTC AAGCCCCCCG CGATGATGCG CGACCTGTTC GCGGACCTGC CGGAAGCCTG CGACAACACG CTGGCCATCG CCCGGCGCTG CGCGGTGCGG GTGGAAACCC GCAAGCCCCT GCTGCCGGTC TGCCCCAAGG TGCAGCCGGG CGCGACCGAG GAGCAGACCC TGCGCGCCAT GGCCGAGGAC GGGCTGGCCC GCCGGCTGGC GCGCATGGAC ATGGATGACG CGACCCGTCA GGTCTATCGC GACCGGCTGA CGTTCGAGCT GGATATCATC GCGAAGATGG GCTTCCCCGG CTATTTCATG ATCGTCGCGG ACTTCATCCA GTGGGCGAAG GCGCATGACA TTCCGGTGGG GCCGGGGCGC GGATCGGGGG CGGGGTCGCT GGCGGCCTGG GCGCTGACGA TCACCGATAT CGACCCGATT CCCTTCAACC TGCTGTTCGA ACGGTTCCTG AACCCCGAAC GCGTGTCGAT GCCCGACTTC GACATCGATT TCTGCCAGGA CCGGCGGGAC GAGGTCATCC GCTACGTCCG CGGCGAATAC GGTCCCGACC GCGTGGCGCA GATCATCACC TTCGGCAAGC TGCAGGCCCG GGCGGCGGTA CGCGACGTGG GCCGCGTGCT GGGCCTGCCG TTCGGCATGG TCAACAAGGT CGCGGAACTG ATCCCCAACA ATCCGGCCAA GCCCGTGACC CTGAAACAGG CGATCGACGG CGAGCCCCGC CTGCAGGAGA TGCGCGATAC CGACGAGGCG ATCCGCCGCC TGATGGAAAT CGCGCTCCAG CTCGAAGGGC TGTACCGCCA CGCCAGCACC CATGCGGCCG GCGTCGTGAT CGGCGACCGG CAACTGGTCG AACTGGTGCC GCTCTACCGC GATCCCAAGA GCGACATGCT GGTCACCCAG TACAACATGA AGTTCGTCGA GCAGGCGGGG CTGGTGAAGT TCGACTTCCT GGGCCTGACC ACCCTGACCA TCCTGCAGCG CGCCTGCCAG TTCCTGAAGG GGCTGGACGT GACGGTCGAT CTGACCACGC TGCCGCTGGA CGACGCCCCG ACGTACGAGA TGCTGGCGCG CGGCGACACG GGCGGCGTGT TCCAGTTCGA AGGCGCGGGC ATGCGCGACG TGCTGAAGCA GATGCGCCCG ACGCGGCTGG AGGACCTGAT CGCCGCCGTG GCGCTCTACC GTCCCGGCCC CATGGCCAAC ATCCCCGATT ACTGCCGCCG CAAGCACGGC GAGGCGTGGG AGCCCCCGCA CGAGGAGATC CGCTCGATCC TGGAAGAGAC CTACGGCATC ATGGTCTACC AGGAACAGGT GATGCAGATC GCCCAGAAGA TGGCGGGCTA CAGCCTGGGC GGTGCCGACC TGCTGCGCCG CGCGATGGGC AAGAAGATCC GCGCCGAGAT GGACAAGCAG CGCGAGATCT TCACCGAGGG CGCGGTCGGT CGCGGCATCG ACCCCGAGAA GGCGGCCGAG GTCTTCGACC TGATGGCCAA GTTCGCGGAT TACGGCTTCA ACAAATCCCA CGCCGCCGCC TATGCGCTGG TGTCGTACCA GACGGCGTGG ATGAAGGCGA ACCATCCGGT GCCGTTCCTG GCCGCCTGCA TGTCTCTGGC GCGGGAAAAG ACCGACAAGC TGGCGGCCCT GCGGCAGGAG GCCGAGCGGC TGGGCATTCC CGTCCTGCCG CCCGACATCA ACGCATCGGG GCCGGATTTC ACCGTCGAGC GCCTGGCCGA CGGCCGCCTG GGCATCCGCT ACGCGCTGGC GGCGGTCAAG AAGGTCGGAT TCGCGGCGAT GGAGGCCCTG GTGGCGTCGC GCGGCGACCG TCCGTTCGCC GACCTGTCGG ACCTGGCGGC GCGTGTGGAC CCGCGCCAGT TGAACAAGAT GCAGATCGAA AACCTGGCCA AGGCCGGGGC CTTCGACACG GTGGTGCCCA ACCGCGCCCT GGTCGCGGCG GCGGCGGAGA CGGTCCTGCG CCGCGCCAAT ACCCAGGCGC AGGAGGCCGC GAGCGGCCAG ATCGGCCTGT TCGGCGGCGG AGGGCCCACG CCGGCGCCGG AACCGCTGCG CCTGCCGGAC GTGACCGACT GGCCGGAATT CGAACGGCTG GGGATGGAGG CCGAGGCCAT CGGCTTCCAC CTGACGGCGC ATCCGCTCGA TTCATACGGC CTGCTGCTGC GCCGCCTGGG GGCCGTGCGC GCCACGGCGC TGGAGGCCGC CGCCCAGGCC GGGCTGACGC GGGTCAAGAT CGCCGGCTGC GTGGTCGACC GCAAGGAACG CCCGACCCGC ACCGGCAGCA AGATGGCCTG GGTGCGCCTG TCCGATTCCA GCGGCGGGTG CGAGGTCACG CTGTTTTCCG AGGTCCTGTC GCGCACCCGC GACATCCTGA CCGCCGGCAC CGCCGTGCTG GTGACGGCCG ATCTGCGCCT GGACGGCGAG GCCCTGCGCA TCACCGGCAG CGACGTGGTG GCGCTGGAAC AGGCGGCGGC CGACGCGGCG GCGGAACTGC GCATCTGGTT CGACCGCGAG GACGCGATCA CCCCGATCCA CGCCATCCTG TCCGAGGAGA AGGGGGGGCG CGGCAAGGTC ATCCTGCTGC CGTCGGTGGC CGAAACCCGC GATGTCGAGG TGCGGCTGGG CGGCGCCTAT CGCGTCACGC CGCGCATGGC CCAGATGATC AAGGCCGTCG CCGGCGTGGC CCGGGTCGAA CAGGGATAG
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Protein sequence | MPHADFVHLR VHSAYSLSQG AIRIPEIASL AQDMRMPAVA ITDTGNLFGA LEFSQYCSGK GVQPIIGCQV GLPPRNDKPG APAEPVVLLA QDETGLMNLQ YLSSQGFLTG DTAEPTVTLD VLCERAEGLI LLTGGTRGPL FRMLADGQQD EVAQWLERLH AAFGDRLAVE LHRHGLPVEK AVEPGMIALA DRMGLPLVAT NECFFPRPEM YEAHDALLCI AQGRTMAERD RWRVTPEHWF KPPAMMRDLF ADLPEACDNT LAIARRCAVR VETRKPLLPV CPKVQPGATE EQTLRAMAED GLARRLARMD MDDATRQVYR DRLTFELDII AKMGFPGYFM IVADFIQWAK AHDIPVGPGR GSGAGSLAAW ALTITDIDPI PFNLLFERFL NPERVSMPDF DIDFCQDRRD EVIRYVRGEY GPDRVAQIIT FGKLQARAAV RDVGRVLGLP FGMVNKVAEL IPNNPAKPVT LKQAIDGEPR LQEMRDTDEA IRRLMEIALQ LEGLYRHAST HAAGVVIGDR QLVELVPLYR DPKSDMLVTQ YNMKFVEQAG LVKFDFLGLT TLTILQRACQ FLKGLDVTVD LTTLPLDDAP TYEMLARGDT GGVFQFEGAG MRDVLKQMRP TRLEDLIAAV ALYRPGPMAN IPDYCRRKHG EAWEPPHEEI RSILEETYGI MVYQEQVMQI AQKMAGYSLG GADLLRRAMG KKIRAEMDKQ REIFTEGAVG RGIDPEKAAE VFDLMAKFAD YGFNKSHAAA YALVSYQTAW MKANHPVPFL AACMSLAREK TDKLAALRQE AERLGIPVLP PDINASGPDF TVERLADGRL GIRYALAAVK KVGFAAMEAL VASRGDRPFA DLSDLAARVD PRQLNKMQIE NLAKAGAFDT VVPNRALVAA AAETVLRRAN TQAQEAASGQ IGLFGGGGPT PAPEPLRLPD VTDWPEFERL GMEAEAIGFH LTAHPLDSYG LLLRRLGAVR ATALEAAAQA GLTRVKIAGC VVDRKERPTR TGSKMAWVRL SDSSGGCEVT LFSEVLSRTR DILTAGTAVL VTADLRLDGE ALRITGSDVV ALEQAAADAA AELRIWFDRE DAITPIHAIL SEEKGGRGKV ILLPSVAETR DVEVRLGGAY RVTPRMAQMI KAVAGVARVE QG
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