Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3263 |
Symbol | |
ID | 6976702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 3573367 |
End bp | 3575289 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643392773 |
Product | oligopeptide transporter, OPT family |
Protein accession | YP_002277605 |
Protein GI | 209545376 |
COG category | [S] Function unknown |
COG ID | [COG1297] Predicted membrane protein |
TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily [TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.697276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATTC GCGGCCTCGT CCTCGGCGCC CTGATCACCA TCGTCTTCAC GGCCTCGAAC ATCTATCTGG GACTGAAGAT CGGCCTGACC GTCGCCTCCT CGATCCCGGC GGCGGTGATC TCGATGTCCG TGCTGCGGAC CATGGGCGGC GCGACGATCC TGGAGAACAA CCTGGTCCAG ACCCAGGCCT CGGCGGCGGG AACGCTGTCA TGCGTCTTCA TCTCGTTCCC CTGCCTGGTC ATGATCGGCC ACTGGCAGCA TTTCCCGTAC CTGGAGACGA CGCTGCTGTC GCTGGCCGGG GGCATGACGG GGGTGCTGTT CACCGTTCCG CTGCGCCGCG CCATGGTGAC GCACAGCAGC CTGCCCTATC CCGAAGGGGT CGCGGCGGCG GAAATCCTGA AGGCGGGATC GGAAGGCGGC AATCCCGACA GCCTGAAGGC GCTGATGACC GGCGGCCTGG TCTCGGCGGT CGTGACGTTC GCGACCGGCG GGCTGCGGCT GCTGTCGGAC GGCGCGTCGG CGACGGCGGT ATGGGGCGGC GCGGTCTTCC GGGCCTCGAC CGGCTTTTCC CTGGCCCTGC TGGGCGCGGG CTACCTGGTC GGAATCGCCG GCGGGCTGGC CATGCTGGTC GGCGCGATCA TCGCCTGGGG CATCGCGGTG CCGGTGCTGA GCACCATGCT GCCCAACACC GCGCACCTGG CGCCCGCCGC CTTCGCCACC CAGGTCTGGG CGCAGAAGGT CCGCTTCATG GGGGCGGGCA CGATCGGCGT CGCGGCCATC TGGACGCTGG CCATGCTGGC GCAGCCGGTG GCGGCGGGCA TCCGCGACAT GCTGCGCGCC GGCCGGTCGG TCGGCGAGGA CAGCCAGTCC CGCGACCTGT CGCCCCGGAC CATGGTGCTG CTGACCGGCG TGTCGCTGGC CATCCTGTTC GGCCTGTTCG TCGCCTTCCA GGCGCCGATC ATGGGGGCGC CGGGCGCGGC CGAGCATGCG ATCATCGGCG CGGCGCTGGC GGCGGTGCTG TTCTGCGCGC TGTTCGGCTT CCTGATAGCC GCCGCCTGCG GCTACATGGC CGGGATCGTG GGGTCGTCAT CCTCCCCCCT GTCGGGGATC GCCATCATCG CGGTCGTCAT GATCGCCCTG TTCCTGCTGG GGCTGGAGCA GGTGGGCCTG CTGCCGGCCC AGATGTCGGC GAACGGGCAT CACCTGGCCA TCGCCTTCGC CCTGTTCATC CTGTCCGCGA TCGTGGCGTC GTCGGCCATT TCCAACGACA ACCTGCAGGA CCTCAAGACC GGGCAACTGG TCGGGGCGTC GCCCTGGCGG CAGCAGGCCG CGCTGCTGGT GGGCTGCATC AGCGGCGCGG TCGTCATCCC GCCGGTGCTG GAACTGCTGT ACCAGGCCTA TGGCTTCGTG GGCGCGATGC CGCGCGCGGG CATGAATCCG GACCATGCCC TGGCGGCGCC GCAGCCCGCC CTGCTGGTCA CGATCGCGAC CGGCATTTTC CAGCACCAGC TGGACTGGAA CATGATCGTG CTGGGCGCTG GCCTGGGGGG CGTGCTGATC GCGGCCGACC TGCTGCTGCG CCGCTGGGCG CGCGCGCTGC CGCCGCTGGC AGTGGGGATC GGCCTGTACC TGCCGCCTGC GGTCAGCGTG ACCCTGGCGA TCGGGGCCGT GCTGGGCTGG GCCTGCACCC GGCGGCGCCC CAGCCTGCGG GCGGAAACCG GAATCGGCAC CATGCTGGCG TCGGGCTTCA TCGTGGGCGA GAGCCTGACC GGCGTGCTGC TGGCCGCCGT GGCCGGGGCC ACCGGCCGCG ACGATACGCT GTCCGTGCTG CCCGCCGGAG CCGACGCGAT GCCCATGGTT CTGGGATTCC TGGTCTTCGT CGCCATATGC ACATGGTTCG GACGCAGCAT CCGCCGCGTG TGA
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Protein sequence | MTIRGLVLGA LITIVFTASN IYLGLKIGLT VASSIPAAVI SMSVLRTMGG ATILENNLVQ TQASAAGTLS CVFISFPCLV MIGHWQHFPY LETTLLSLAG GMTGVLFTVP LRRAMVTHSS LPYPEGVAAA EILKAGSEGG NPDSLKALMT GGLVSAVVTF ATGGLRLLSD GASATAVWGG AVFRASTGFS LALLGAGYLV GIAGGLAMLV GAIIAWGIAV PVLSTMLPNT AHLAPAAFAT QVWAQKVRFM GAGTIGVAAI WTLAMLAQPV AAGIRDMLRA GRSVGEDSQS RDLSPRTMVL LTGVSLAILF GLFVAFQAPI MGAPGAAEHA IIGAALAAVL FCALFGFLIA AACGYMAGIV GSSSSPLSGI AIIAVVMIAL FLLGLEQVGL LPAQMSANGH HLAIAFALFI LSAIVASSAI SNDNLQDLKT GQLVGASPWR QQAALLVGCI SGAVVIPPVL ELLYQAYGFV GAMPRAGMNP DHALAAPQPA LLVTIATGIF QHQLDWNMIV LGAGLGGVLI AADLLLRRWA RALPPLAVGI GLYLPPAVSV TLAIGAVLGW ACTRRRPSLR AETGIGTMLA SGFIVGESLT GVLLAAVAGA TGRDDTLSVL PAGADAMPMV LGFLVFVAIC TWFGRSIRRV
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