| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3216 |
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| Symbol | |
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| ID | 6976656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3520057 |
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| End bp | 3523047 |
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| Gene Length | 2991 bp |
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| Protein Length | 996 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643392729 |
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| Product | virulence factor SrfB-like protein |
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| Protein accession | YP_002277561 |
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| Protein GI | 209545332 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4457] Uncharacterized protein conserved in bacteria, putative virulence factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.952482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGGCT TGATCTCGTT GATTCCCGAC AGCCTGATCC AATTCGAGAC CATTACGCTG
GACGCCGCCG AATGCGGCAG AATCCGGGCG AATTTCTGGG AGGAGTCCAC CGGGATCAAC
GGGGACGGGG CGCCGGAATT CATCCTGCGC GCGCTTGAGG AAGACCCCGA AAGCAGGAAC
ATGGTGTTCC ACGCCGATGG CCGCCAGCGG GTGGCGCCGG ACGATGCAGG GTATGTCATC
AGGCGCAAGG ACATTTTCGA GGTTTTCGAG AATGAGTGGG TGCCGCTGCC GTATCTTGCG
CGGATCGGAA GCACCGACAA TGAGGGATTT CGCCCCGGTC CGGCAAACTG GGTCAGGGGC
CGGCTGCGCC GCACGGAAAC CCGGGAAGGG GAGGAGGCGA TTCTCCTCAA CATCGCCTTC
GACACCACGG TCGCGCCGCA TTTCGACGGG CGCTACTTGG CGCCGACCCC CGATGACGAG
GCGCGGGGCC AGAAATTCGC GTTCGTCGCC GACCTGGAAA GCATTTCCTG GCTGATCGAC
AGTTCCTGGC TGAAGGACTG GCTGGAGGAA TTGCAGCGCG AGGCCGCGCT TGCCGTCCCC
GGCCGGAAGC GCCCGGCGCC CGAGGAGGAG GAAAAGCAGC CGGTCCTGAA GCATCTTGCG
ACCTATTTGG CCTTCCTGCG GATGGTGGCG CAGGCCGGAG CGCCGCCGAT CGCGCAGATC
CTGACGGTGA CGAACGAACC GCCGGTCGCG GTCGATCTGG TGCTGGATCT GGGGAATTTT
CGCAGTTGCG GTATCCTGAT CGAGGAACAT CCGGGGACGC GCCAGCGCGA AGCCGACAGC
TACGTCCTGG AACTGCGCGA CCTCGCCCAG CCTGAACTGG CCTATGGCGA CCCGTTTTCC
AGCCGGATCG AGTTCGGACG GGCGACGTTC GGGCGGGATT CCCATTCGCG CCGCTCCGGC
CGGCCCCATG CCTTCGTGTG GCAGAGCCCC GTGCGGACCG GGCCCGAGGC CGAACGGATG
ATGGGGGCAC GGATCGGTAA CGAGGGGCTG TCGGGCCTGT CTGCTCCCAA ACGCTATCTG
TGGGACACCC GGCCGTCCGA CCAGGGATGG CGCTTCAATA ATGGCCTTAA CCGAGACGGC
CAGCCGTCCG ATCCGGCGGT CAACGGCCCG TTCCGCCGTG CGATCCAGGA AACGCTGGGC
GCCCAGCGGC GGTTCAGGGT CAGCCTGGAC GACGTGAAGG CGGCGCAGCC CGTGGGGCCG
AGCGTGCTGT CGCGCAGCCT GCTGTTCATG CTGATGTTGA GCGAACTGAT CATGCAGGCG
ATCATGTATA TGAATTCGCC GGGCTTTCGG TCCAAGCGGC GGGACAGCGC GCGTCCGCGC
CTGCTGCGTT CGGTGATGCT GACAATGCCG CCTGGAATGC CCGTGGCGGA ACAGCGGATT
TTCCGTGCCC GGGCCGAGGC GGCGATCGCG TTCGTCTGGA GCGTGACGGG GCGCACGGGC
AAGCCGCCAA CGCTGCGCGC CGAACTGGAC GAGGCCACGG CGACGCAGAT CGTCTGGCTG
CATAACGAGG TGACGGAGCG GCTCGGCGGC CATGTCGAGG CGCTGTTCGA TCTATATGGC
GACGGCCGCG TGGGCGAGGA CGGGCGGCCG GCAGTCCGTG TCGCGAGCAT CGACATCGGG
GGCGGCACCA CCGACCTGAT GATCACGACC TATACCCATA TAGGGGGCGA CGCGCTGTCC
CCGCACCAGG ATTTCCGCGA GAGCTTCAAG ATCGCCGGGG ATGACCTGCT TGAACGTGTC
ATCCTGACCG TGGTGCTGCC CCCGTTGGAA AAGGCGCTGA CCGACGCGGG CATCGCCGAG
GCGCACCAGC TTCTGGTCCG TCTGCTGGAA CGGGATTACG GCAACCAGGA CGAGCGCGAC
CGTCACCGCC GCAGGCTGTT CGTTTCGACC GTTCTCGAAC CCACCGCGCT GCGGGCGCTG
AGCCTCTACG AACAGGTGGA CGACCTGACG CAGGGGGGAA TCGGGCGATT CGCGCTGGGT
GACGACACGG TGGCCCGTAG GGATGACGAC CATCGGAAAC GCTGTGCCGC TTTCCTGCGC
GAGCAGGTCG ATACCCATAT GCGTGGCCTG AACATCGGCG ACGGCCCGCC CGATTTTGAC
CTGTTCGGCG TGGTGGTCGA GGTCGAGGTG GAAACGATCG AGAAGGCGAT CCGCGCGACG
CTGGATACGG TTCTGGGCAG CCTCACCGAA CTGGTCTGGG CCTATGGATG CGATGTCCTG
CTGTTGTCGG GGCGCCCGTC GAAGCTGCGC CGGGTGAGGA ACCTGGTCAC GGGCGCGATG
CCCGTCGCCC CGCACCGGAT CGTCGCGATG CACGATTACA CGGTGGGCCG GCACTATCCC
TTCACGGATT CCGCGGGCCG GATCAGCGAC CCCAAGACGA CCGTCGTCGT CGGTGCGGCG
CTGTGCATCA AGGCCGAGGG AAAGCTCCAG AATTTTGTCC TGAGAACGGG GAAGCTGGTC
ATGCGCTCGA CAGCGCGGTT CCTAGGCAGG ATGGAGCGGA CCGGAATGAT CCGCAAAGCC
GATATTCTGC TGGAGAACGT CGATCTGGAC GATCGTCCCA GCGACGAGGA TATCCGCTTC
CCGCTGGGGG ATTTCGAAGG AATGACCATG ATCGGTTTCC GCCAGCTCCC GCTGGAGCGG
TGGACGACGA CGCCTCTTTA TTGCGCGGAG TTCGCTGCTG GCACGCGCGA GGAAACGCAG
CGCCTGGCCA TGCCGCTGAC CATCGAATTC GACCGGAAAC CCGATATCGA GGACGCCGAG
GAAAAGGGTG ATTTCTCGGG ACGCGAGGAT TTTAGCGTCA GCGAGATTAC CGATGCCGAC
GGGCAGCCTG TTCGTCGCAG CCTGATCATC CTGCGCTTGC AGACCACGCT GAACCCCGAA
GGCTACTGGC GCGATACCGG GTGCCTGACG CTGGGAGCGA CCCTGCCGTG A
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| Protein sequence | MPGLISLIPD SLIQFETITL DAAECGRIRA NFWEESTGIN GDGAPEFILR ALEEDPESRN
MVFHADGRQR VAPDDAGYVI RRKDIFEVFE NEWVPLPYLA RIGSTDNEGF RPGPANWVRG
RLRRTETREG EEAILLNIAF DTTVAPHFDG RYLAPTPDDE ARGQKFAFVA DLESISWLID
SSWLKDWLEE LQREAALAVP GRKRPAPEEE EKQPVLKHLA TYLAFLRMVA QAGAPPIAQI
LTVTNEPPVA VDLVLDLGNF RSCGILIEEH PGTRQREADS YVLELRDLAQ PELAYGDPFS
SRIEFGRATF GRDSHSRRSG RPHAFVWQSP VRTGPEAERM MGARIGNEGL SGLSAPKRYL
WDTRPSDQGW RFNNGLNRDG QPSDPAVNGP FRRAIQETLG AQRRFRVSLD DVKAAQPVGP
SVLSRSLLFM LMLSELIMQA IMYMNSPGFR SKRRDSARPR LLRSVMLTMP PGMPVAEQRI
FRARAEAAIA FVWSVTGRTG KPPTLRAELD EATATQIVWL HNEVTERLGG HVEALFDLYG
DGRVGEDGRP AVRVASIDIG GGTTDLMITT YTHIGGDALS PHQDFRESFK IAGDDLLERV
ILTVVLPPLE KALTDAGIAE AHQLLVRLLE RDYGNQDERD RHRRRLFVST VLEPTALRAL
SLYEQVDDLT QGGIGRFALG DDTVARRDDD HRKRCAAFLR EQVDTHMRGL NIGDGPPDFD
LFGVVVEVEV ETIEKAIRAT LDTVLGSLTE LVWAYGCDVL LLSGRPSKLR RVRNLVTGAM
PVAPHRIVAM HDYTVGRHYP FTDSAGRISD PKTTVVVGAA LCIKAEGKLQ NFVLRTGKLV
MRSTARFLGR MERTGMIRKA DILLENVDLD DRPSDEDIRF PLGDFEGMTM IGFRQLPLER
WTTTPLYCAE FAAGTREETQ RLAMPLTIEF DRKPDIEDAE EKGDFSGRED FSVSEITDAD
GQPVRRSLII LRLQTTLNPE GYWRDTGCLT LGATLP
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