| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3080 |
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| Symbol | |
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| ID | 6976514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3370362 |
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| End bp | 3372263 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643392588 |
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| Product | response regulator receiver sensor signal transduction histidine kinase |
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| Protein accession | YP_002277425 |
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| Protein GI | 209545196 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00766415 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGGCG GCGCGTCCCA GGCCGCCGCA TCGCGGGCGG TCCCGCCGCA GGAGGGGCCG
GCACGGCCGG CGCTGCTGCT GGTCGAGGAT TCCGATACCC AGGCGCTGCG CATCCGGCGG
ATGCTGGAAA GCCACGGCTT CGCCGTGACC CGGGTGGCCA GCGGCGAGGC CGCGCTGGAT
TCCCTGGACG GGCGGATTCC CGACCTGGTG GTGGCCGATT ATCACCTGCC GGGCATGAAT
GGCGGGCAGA TGGCCCGGCA ACTGCGCATG AGCGCGGTCA CGCGCATGAT TCCCGTCCTG
ATGCTGACCG AGGGCGGCGA GCCGGGGCTG GAGCGCGAGG GGCTGGAAAG CGGCGCCGAT
GCCTATGTGC CCAAATCGGC CGACCCGGAC CTGATCGTCT TTCGCATCCG CGCGCTGCTG
CGCGAGGGCG CGGGCGCGCT GCTGCGTGAC GGCGCGGGGG CGCGCGACGG CATGTTCCGC
CGGGCGCGTA TCCTGATCGT GGGCGGCGAC GGGACGCGTG ACCGTGACGT GACGTCGCTG
GCGGCCCTGA TGCGCAGCGA CGGGCACGAG GTCACGGTGG CCCACCAGCC GATGTCGATG
GACCGGCAGG ACTGGTTCGA AGCGGCGCGC GAACCCGACT GCGTGGTCGT GGACCTGGTG
TCCGACGCCT TCGACGGCAT CGCCTTCTGC CGCGAACTGG ACGATGTGCG GCAGGAGGTC
GTGGTGGCGG GCGGCGTGCC GCCCCGCATC CTGGGGCTGA GCGGCGGGCA GGCGCTGCGG
GGCGTGTTCT CGGCCCGGGC GTTCGAGGCC GGGGTGGACG ACCTGGTGGC CGACGATGTC
GAGCCCGACG TGCTGGCGCT GCGCATCCGC GCGCTGGTGC GGCGCAAGCT GCTGCAGGAC
GAGGCGCGGC GCGTGGACCA GGAACGGCAG GCGCGCGAGA TCGCGGTGGA GACCGCGCGG
GCCGAGGCGG CGTCCATCGC GTCCAAGGCC TCGCTGGCCG AGGCGCTGGA ACAGGCCAAC
GCCGAACTGG CCGATGCCAA CCGCAAGCTG ATCGAAACCC AGGGCAAGCT GATCCAGACC
GCCAAGATGG CCTCGCTGGG CGAACTGGTG GCCGGCATCG CGCACGAGAT CAACAATCCG
CTGGCCTTCA TCCTGGCGCA CAAGGACACG GTCGCCCGCC TGCTGGCGCG GGTGATCGCG
GATGAGGAAC GCGATGCGGC GCCGGCGGAT GCCGGGCATC ATGCCGCGCT GATGAAATGC
CGCGATCGCG TCGAATCGAT GAACCTGGGG TTGCGGCGAA TCCAGAACCT GGTGCTGAAC
CTGCGCAAGT TCTCGCGCCT GGAAGAAGGC CAGTTCCAGG TCATCGACGT GCCGGAGGCG
CTGGAGACGG TGCTGGCGCT GCTGGGGCAG AAATTCGGCA GCGAGATCGT GGTGGAACGG
GATTATCGCG CGCCCGACCG GCTGTATTGC CAGTCGGCGC TGCTCAACCA GGTGCTTATG
AACATCATCA GTAACGCCGC CGACGCGATA CAGTCCATGA GCGACGCGGG ACCCGCGCGG
GGCATGATCC GGATCGGCAC CGAACTGCGC GACGGCGAGG CGGGGCGGAC CTATGTCTTC
ACCGTGATGG ATAACGGGCC GGGGATTCCG CCGGACCTGA AGGAGCGGAT CTTCGAGCCG
TTCTTCACCA CCAAGCCGGT CGGCGCGGGC ACCGGGCTGG GGCTGGCCAT CGCCTATGGC
GTCGTGCAGG CCCATCGCGG CACGATCTCG ATCACCGATG CGCCGCGTTC GGCCGACGGG
GCGGCCGCCG GCGGGACGGT CTTCACCGTG TCCGTGCCGT GGCAGCCGCA TCTGGCGGCC
ATGGCCGATT CCACCGCCCT GCCGGCGGGA GAACACGCAT GA
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| Protein sequence | MTGGASQAAA SRAVPPQEGP ARPALLLVED SDTQALRIRR MLESHGFAVT RVASGEAALD
SLDGRIPDLV VADYHLPGMN GGQMARQLRM SAVTRMIPVL MLTEGGEPGL EREGLESGAD
AYVPKSADPD LIVFRIRALL REGAGALLRD GAGARDGMFR RARILIVGGD GTRDRDVTSL
AALMRSDGHE VTVAHQPMSM DRQDWFEAAR EPDCVVVDLV SDAFDGIAFC RELDDVRQEV
VVAGGVPPRI LGLSGGQALR GVFSARAFEA GVDDLVADDV EPDVLALRIR ALVRRKLLQD
EARRVDQERQ AREIAVETAR AEAASIASKA SLAEALEQAN AELADANRKL IETQGKLIQT
AKMASLGELV AGIAHEINNP LAFILAHKDT VARLLARVIA DEERDAAPAD AGHHAALMKC
RDRVESMNLG LRRIQNLVLN LRKFSRLEEG QFQVIDVPEA LETVLALLGQ KFGSEIVVER
DYRAPDRLYC QSALLNQVLM NIISNAADAI QSMSDAGPAR GMIRIGTELR DGEAGRTYVF
TVMDNGPGIP PDLKERIFEP FFTTKPVGAG TGLGLAIAYG VVQAHRGTIS ITDAPRSADG
AAAGGTVFTV SVPWQPHLAA MADSTALPAG EHA
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