| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_3002 |
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| Symbol | |
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| ID | 6976436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 3279871 |
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| End bp | 3281421 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643392510 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002277347 |
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| Protein GI | 209545118 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGC CATTTTCCCT GATGTCCCGC CGGGGCGCCC TGCATCTGGG CGGCATTCTG
GCACCGCTGG CGCTGGCCGG CTGCATGGTC GGGCCATCCT ACCACCGCCC CGCCGCCCCG
GTTTCGGCCC GCTTCAAGGA ACTGACCCCG GCCGCAGGCT GGGAACGCGC CCGGCCCGCC
ATGGCCGAAC TGCCCAAGGG CGCCTGGTGG ACGATCTATA ACGATCCCGT CCTGAACCGA
CTGGAATCGC AGGTCGCGAT CTCGAACCAG AACGTGCGGA TGTACGAGGC CAACTACCGC
CAGGCCCGCG CCATGATCGA CAGCGTGCGG GCACAGCTTT TTCCCACCCT CAGCGGCAGC
CTGGGGTTCA ACCGCAACAG CCAGGGGCGT GGCTCGCGCT CGGCGTCCAC CGGCAGCCTG
GTCAGCTACG GGGGGGCGGC GACCAACACG ACCGAGACGA CCTATTCGAT GGGCCCCAGC
GCAAGCTGGG ACCTGGATCT GTGGGGCCGC ATCCGCCGCA ATATCCAAAG CCAGGTGACC
GAGGCCCAGG CCAGCGCCGC CGACCTGGCG AATGCCACCC TGTCCTACCA GGCGCAGCTC
GCCACGGCCT ATTTCAACCT GCGCTACCAG GATTCGCTGC AGGAGCTGCT GCGCCGCTAC
GTGGATTTCA ACACCCAGGC GCTGCAGATC ACGCAGAACC AGTACGAGGC CGGCACCGCC
GATCCGACGG CGGTGATGCA GGCCCGCACC CAGCTTGAAC AGAATCGTGC CACGCTGATC
CAGGCCGGCA TCGCCCGCGC GCAGTACGAA CACGCCATCG CGGTGCTGAT GGGCCGTCCG
CCCGCCGACC TGACGATCAC GCCCGGCACG CTGCCCCGCC AGATCCCCGC CATTCCGGTC
GGGGTCCCCG CCGACCTGCT GCAGCGCCGC CCCGACGTGG CCGCCGCCGA ACGGGCCATG
GAACAGTACA ACGCCCAGAT CGGCGCCGAC ATGGCGGCGT TCTTCCCCGA CGTCACGCTG
ACGGCCGACT ATTCCTACAG CGGCGACCCC ATCGGGCAAC TGGTCCAGGT GGTCAACCGG
ATCTGGTCGC TCGGCGCCTC GGCCTCGGAA GTCCTGTTCC AGGGCGGGTC CCGCATGGCG
GCGGTGCACG GCGCCAACGC CCAGTACGAC AGCGCCGTCG CGACCTACCG CCAGACCGTG
CTGACGGCCC TGCAGAATAC CGAGGACAAT CTGTCCAACC TGCGCATCCT TGAACAGCAG
GCAACCCAGC AGCAGATCGC CCTGGATTTC GCCAACCAGG CCGTCCAGGT CTCACTGAAC
CAGTACGAGG CCGGAACCCA GATCTACACC ACGGTCATCA CCAACGAGAC CACGGCCCTC
AGCAATGCCG AATCCGCCCT GTCCATCCAG CAGCAGCGCA TGGTCGATTC CGTGGCGCTG
GTGCAGGCGC TGGGCGGCGG GTGGAACGCC ACCAGCCTGC CGTCGAAGGC TTCGATGCAG
ACCGACAATC CGTTCCTGCC CTCCTTTATC CAGAAGGACA AAAACCAGTA G
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| Protein sequence | MTSPFSLMSR RGALHLGGIL APLALAGCMV GPSYHRPAAP VSARFKELTP AAGWERARPA
MAELPKGAWW TIYNDPVLNR LESQVAISNQ NVRMYEANYR QARAMIDSVR AQLFPTLSGS
LGFNRNSQGR GSRSASTGSL VSYGGAATNT TETTYSMGPS ASWDLDLWGR IRRNIQSQVT
EAQASAADLA NATLSYQAQL ATAYFNLRYQ DSLQELLRRY VDFNTQALQI TQNQYEAGTA
DPTAVMQART QLEQNRATLI QAGIARAQYE HAIAVLMGRP PADLTITPGT LPRQIPAIPV
GVPADLLQRR PDVAAAERAM EQYNAQIGAD MAAFFPDVTL TADYSYSGDP IGQLVQVVNR
IWSLGASASE VLFQGGSRMA AVHGANAQYD SAVATYRQTV LTALQNTEDN LSNLRILEQQ
ATQQQIALDF ANQAVQVSLN QYEAGTQIYT TVITNETTAL SNAESALSIQ QQRMVDSVAL
VQALGGGWNA TSLPSKASMQ TDNPFLPSFI QKDKNQ
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