Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2957 |
Symbol | rplA |
ID | 6976391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3238699 |
End bp | 3239394 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643392465 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_002277302 |
Protein GI | 209545073 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.0502013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAAGA ACAAGCGTCT GACGGCCGCC CAGGCCACTG TGGATCGTAA CAAGGCCTAT GGCCTGGACG AGGCGATCGC CCTGGTGAAG CAGGTGGCGA CCGCCAAGTT CGATGAGACG ATCGAGATCT CGCTGAACCT GGGCATCGAC CCGCGTCACG CCGACCAGAT GGTCCGTGGC CTGCTCTCGC TGCCGAACGG CACGGGCAAG ACCCTGCGCG TGGGTGTGTT CGCCCGTGGC GCGAAGGCCG AGGAAGCCCT GGCCGCCGGT GCCGACGTGG TCGGCGCCGA GGACCTGGCC GAGAAGGTGC AGGCCGGCGA GATCGCGTTC GACCGCTGCA TCGCGACGCC GGACATGATG GCCCTGGTCG GCCGCCTGGG CAAGATCCTG GGCCCGCGCG GCCTGATGCC GAACCCCAAG CTCGGCACCG TGACTATGGA CGTCAAGGGC GCCGTCACGG CGGCCAAGTC CGGTCAGGTC GAGTACCGCG CCGAAAAGGC CGGTATCATC CATGCCGGCA TCGGCAAGGC GTCCTTCGAG GGCGACAAGC TGGCCGAGAA CATCCGCGCG TTCGTCGATG CGGTGCAGAA GGCCAAGCCG ACGGGTGCCA AGGGCACCTA CCTGCGCAAG GCCGCCCTGT CCTCGACGAT GGGCCCGGGT ATTCGCGTCG ACGTGTCCGC CTTCTCGGCG GGCTGA
|
Protein sequence | MAKNKRLTAA QATVDRNKAY GLDEAIALVK QVATAKFDET IEISLNLGID PRHADQMVRG LLSLPNGTGK TLRVGVFARG AKAEEALAAG ADVVGAEDLA EKVQAGEIAF DRCIATPDMM ALVGRLGKIL GPRGLMPNPK LGTVTMDVKG AVTAAKSGQV EYRAEKAGII HAGIGKASFE GDKLAENIRA FVDAVQKAKP TGAKGTYLRK AALSSTMGPG IRVDVSAFSA G
|
| |