Gene Gdia_2905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2905 
Symbol 
ID6976338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3181881 
End bp3183143 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content68% 
IMG OID643392414 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_002277251 
Protein GI209545022 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0812246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.235064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGA AAAAGCTGCA TTTTCTTCCG GTTATCGTTC TTTGCTCTGG ACGGGTTCCG 
GAAAATGACC ATAAAGTCGC CGAATATGAT GCGGATCCTG TGACGGGGGA ACGGGCGTTG
GCCGACGGCT CATGGACGGA CAGGCGGGGG ATGGACGCCG GGCGGGGATG GTTCGCCCGA
CTGCGTCATG TCGCGGCATC GGGGCGCGGG AAGGTGCTGC GCCTGTCCTT CGGCCTGTCG
GTGGGGTGCG CCGCCGTCAT GGCGGGCTTC GTGCCCCGGG CCCATGCCCA GTATGTCGGC
CAGATCAGCT CGATCGTCAT GGACGCCCGC ACCGGGGCGA TCCTGTCGCA ATCCAATCCC
GACCTGCAGC GGTTTCCCGC CAGCCTGACC AAACTTATGA CGCTGTACCT GGCGTTCAAG
GCCCTGCATG CCGGCCAGAT CACGCTGGAC CAGTCGGTGC CCGTGTCGGC CCATTCCGCA
TCGATGGAAC CGTCGAAGCT GGGCCTGATG CCGGGCAGCT ACCTGACGGT CGAACAGGCG
GTGCTGGGGC TGGTGACCAA GTCGGCCAAC GACGCGGCCT GCGCCCTGGG CGAACTGATG
GGCGGCGGGG ATGAGGGCCG GTTCGCCGAC CTGATGACCC GTCAGGCCCG GGCGCTGGGG
ATGACCAGGA CCACCTTCCG CAACGCGTCC GGCCTGCCGA ATGACGAGCA GGTGACATCG
GCGCGCGACC TGGCGCTGCT GACGCGGCAG ATCATCACCG AATTCCCGGA TTATTATCAT
TATTTCTCGG TCCCGGCCTT CTATTTCCAC GGGCGGCAGG TGCCCAACCA CGACCCGATG
CTGCGGATCT ATCCGGGGGC GGACGGGCTG AAGACCGGAT ACACGACCGA TGCCGGCCGC
AACCTGGTCA CGTCCGCGAT TCGCGAGAAC GTGCGCCTGA TCGGCGTGGT GCTGGGCGCG
CGGACCAACC CGCAGCGCAG CGCCGTCATG GCCAGCATCC TGGATGACGG GTTCCGCCAG
GAAGGGGTGG CGGACGTGCG CCGTCCGCTG GTGCTGGCGC GCGGGCATCG CGGCCGGGCG
GCGATCATGC TGGCCGCGGC CGCGCGGGCG GCCAATGCGG GCCCCGAACA GGTGGCCGAA
GCGCCCGTGG CCCCCCGCCG CCATGGCGTG GCGCGACATG CGCACGCCCG TGTTCCGGCG
CATGTCCATA TGGTCGCGGC CGGTCATGTC GCGCACCGCC GCCGTGGACA CAACCAGGGC
TGA
 
Protein sequence
MATKKLHFLP VIVLCSGRVP ENDHKVAEYD ADPVTGERAL ADGSWTDRRG MDAGRGWFAR 
LRHVAASGRG KVLRLSFGLS VGCAAVMAGF VPRAHAQYVG QISSIVMDAR TGAILSQSNP
DLQRFPASLT KLMTLYLAFK ALHAGQITLD QSVPVSAHSA SMEPSKLGLM PGSYLTVEQA
VLGLVTKSAN DAACALGELM GGGDEGRFAD LMTRQARALG MTRTTFRNAS GLPNDEQVTS
ARDLALLTRQ IITEFPDYYH YFSVPAFYFH GRQVPNHDPM LRIYPGADGL KTGYTTDAGR
NLVTSAIREN VRLIGVVLGA RTNPQRSAVM ASILDDGFRQ EGVADVRRPL VLARGHRGRA
AIMLAAAARA ANAGPEQVAE APVAPRRHGV ARHAHARVPA HVHMVAAGHV AHRRRGHNQG