Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2896 |
Symbol | |
ID | 6976329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3172302 |
End bp | 3173060 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643392405 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002277242 |
Protein GI | 209545013 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0691773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0221679 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATGA CGGTACTGGT GACGGGGGCG ACGGCGGGAT TCGGCCGCGC GATCGCGGAA CGATTGGTGC GTGACGGTTA TCGCGTGATC GCGACCGGGC GACGCCAGGA CCGCCTGGAC GCGCTGGCGA AGGCGCTGGG GCCATCGCTG CTGCCCTTCC GCCTGGACAT GAACGATGCC GACGCCCTGG CGGCCCTGCC GGGCAGCCTG CCCCCCGGCT GGCAGGAAAT CGATATTCTG GTCAACAATG CCGGCCTGGC CCTGGGCCTG GACAAGGCGC AGGACGCCAC GATCGCGGAC TGGCAGCAGA TGATCGCGAC CAACGTGACG GGCCTGGTCG AAATCACCCG CGCCCTGCTG CCGGGGATGG TCGCGCGCAA TCGCGGGCAC GTCATCTCGC TGGGCAGCAC GGCCGGGACC TATCCGTATC AGGGGGCCAA TGTGTACGGC GCGTCCAAGG CGTTCGTGTC GCAGTTCATG CGCAACCTGC GCTGCGACCT GCTGGGGACG CGGGTACGGG TGACCAACCT GGAACCCGGC CTGTGCGGCG GCAGCGAATT CAGCACCGTG CGCCTGCGCG ACGACGCCAA GGCCGCCGCC GTGTACCAGG GCACCCATCC CATCCTGCCC GAGGACATCG CCGAAACCGT ATCCTGGGTG ATGGGCCTGC CGGCGCATGT GAACATCAAC CAGATCGAGC TGATGCCGAC CTGCCAGGCC GCGGCGGGCC TGGCCGTGGT CAAGGGGCTG GAGGATTGA
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Protein sequence | MAMTVLVTGA TAGFGRAIAE RLVRDGYRVI ATGRRQDRLD ALAKALGPSL LPFRLDMNDA DALAALPGSL PPGWQEIDIL VNNAGLALGL DKAQDATIAD WQQMIATNVT GLVEITRALL PGMVARNRGH VISLGSTAGT YPYQGANVYG ASKAFVSQFM RNLRCDLLGT RVRVTNLEPG LCGGSEFSTV RLRDDAKAAA VYQGTHPILP EDIAETVSWV MGLPAHVNIN QIELMPTCQA AAGLAVVKGL ED
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