Gene Gdia_2896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2896 
Symbol 
ID6976329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3172302 
End bp3173060 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content69% 
IMG OID643392405 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002277242 
Protein GI209545013 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0691773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0221679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGA CGGTACTGGT GACGGGGGCG ACGGCGGGAT TCGGCCGCGC GATCGCGGAA 
CGATTGGTGC GTGACGGTTA TCGCGTGATC GCGACCGGGC GACGCCAGGA CCGCCTGGAC
GCGCTGGCGA AGGCGCTGGG GCCATCGCTG CTGCCCTTCC GCCTGGACAT GAACGATGCC
GACGCCCTGG CGGCCCTGCC GGGCAGCCTG CCCCCCGGCT GGCAGGAAAT CGATATTCTG
GTCAACAATG CCGGCCTGGC CCTGGGCCTG GACAAGGCGC AGGACGCCAC GATCGCGGAC
TGGCAGCAGA TGATCGCGAC CAACGTGACG GGCCTGGTCG AAATCACCCG CGCCCTGCTG
CCGGGGATGG TCGCGCGCAA TCGCGGGCAC GTCATCTCGC TGGGCAGCAC GGCCGGGACC
TATCCGTATC AGGGGGCCAA TGTGTACGGC GCGTCCAAGG CGTTCGTGTC GCAGTTCATG
CGCAACCTGC GCTGCGACCT GCTGGGGACG CGGGTACGGG TGACCAACCT GGAACCCGGC
CTGTGCGGCG GCAGCGAATT CAGCACCGTG CGCCTGCGCG ACGACGCCAA GGCCGCCGCC
GTGTACCAGG GCACCCATCC CATCCTGCCC GAGGACATCG CCGAAACCGT ATCCTGGGTG
ATGGGCCTGC CGGCGCATGT GAACATCAAC CAGATCGAGC TGATGCCGAC CTGCCAGGCC
GCGGCGGGCC TGGCCGTGGT CAAGGGGCTG GAGGATTGA
 
Protein sequence
MAMTVLVTGA TAGFGRAIAE RLVRDGYRVI ATGRRQDRLD ALAKALGPSL LPFRLDMNDA 
DALAALPGSL PPGWQEIDIL VNNAGLALGL DKAQDATIAD WQQMIATNVT GLVEITRALL
PGMVARNRGH VISLGSTAGT YPYQGANVYG ASKAFVSQFM RNLRCDLLGT RVRVTNLEPG
LCGGSEFSTV RLRDDAKAAA VYQGTHPILP EDIAETVSWV MGLPAHVNIN QIELMPTCQA
AAGLAVVKGL ED