| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2881 |
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| Symbol | |
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| ID | 6976313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 3151647 |
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| End bp | 3155153 |
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| Gene Length | 3507 bp |
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| Protein Length | 1168 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643392389 |
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| Product | methionine synthase |
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| Protein accession | YP_002277227 |
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| Protein GI | 209544998 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0934972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC GTCCCCATCT TCTCGACGCC CTTCGCGACC AGGTGCTGCT GTGTGACGGC
GGCATGGGGT CGCGCGTGCA GGTGCTGGAC CTGGATGTCG AGCGCGACTA CTGGGGGCAG
GAGAACTGCA CCGAGATCCT GAACCTGTCG CGCCCCGAAC TGGTGCGTGA GATCCATCGC
GGCTATTTCG AGGCCGGGGC GGATATGGTC GAGACCAATT CGTTCGGCGG CACGCCCATC
ACGCTGGGCG AATTCGGGCT GGCCGACCGG GCGCGCGAGA TCAACCGCAC CGCCGCCCAC
CTGGCGCGCG AGGCCGCCGA GAGCTTCGCC GACGGCCGCC ACCGCTACGT CATCGGATCG
GTCGGGCCGG GGACCAAGCT GCCGTCGCTG GGCAATATCG ACTACGACAC GCTGGAAGCC
GGGCTGGCCG AGCAGTGCCG CGGCCTGATC GACGGCGGCG TGGACGCGCT GCTGATCGAA
ACCTGCCAGG ACACGCTGCA GATCAAGGCC GCCGTCAACG GTGCCAAGAT CGCCCGCGCC
GAGTTGGGCA CCGATACCCC GATCTTCGTC CAGGTGACAG TGGAAACCAC CGGCACCCTG
CTGGTCGGCC CCGACATCGC CGCCGCCGCC ACCGCGATCC ACGCGCTGGA TGTGCCGCTG
ATGGGCCTGA ACTGCGCCAC CGGCCCGCAG GAAATGGCCG AGCACGTGCG CTGGCTGGCC
GGCAACTGGC CGGGCCTGAT CTCGATCCAG CCCAATGCCG GCCTGCCGGA ACTGGTGGAC
GGGCAGACCC ACTACCCGCT CTCGCCCGCC GACATGGCCA CCTGGGTGGA CCGCTTCATC
ACCGAGGACG GGCTGAACCT GGTCGGCGGG TGCTGCGGCA CCTCCACCCC GCATATCGCG
GCGCTGGACG CCATGCTGCG CCGCCGGGCC GAGGGCACCG GCCGCCACCG CCCCGCCCCG
GTCCCGCGCC GCCCGGTCTG GATTCCGTCG GTGTCCAGCT TGTACACTCA GGTGCCGCTG
CGCCAGGAAA ACAGCTATTT CTCGATCGGC GAGCGCTGCA ACGCCAACGG GTCGAAGAAA
TGGCGCACCC TGCAGGAAGA GGGCGACTGG GACGGCTGCG TCTCCATCGG GCGCGAACAG
GTGGCCGAGG GGTCGAACGC GCTGGACCTC TGCACCGCCT TCGTCGGCCG CGACGAAATG
CGCGAGATGA ACGAGGTCGT GACCCGCTTC ACCTCTTCGG TCAACGCGCC GCTGGTCATC
GATTCCACCG AAACCCCGGT GATCGAGGCC GCGCTGAAGC TGTACGGCGG CAAGGCGATC
ATCAACTCGA TCAATTTCGA GGACGGCGAG GGCCACGCCA CCGACCGCAT GCTTCTGGCG
CGCAAGTTCG GCGCCGCCGT CGTGGCGCTG ACCATCGACG AAGTCGGCAT GGCCAAGACC
GCCGAGGACA AGCTGCGCAT CGCCACCCGC CTGGTCGAAT TCGCCTGCGA CCGGCATGGA
CTGCCGCAAT CCGACCTGAT GATCGACCCG CTGACCTTCA CCATCGGCAC GGGGGTCGAG
GACGACCGCA AGCTGGGGCT GTGGACGCTG GAGGGCATCC GCCAGATCCG CGACCGCTTC
CCCGACATCC AGATCGTGCT GGGGCTGTCG AACATCTCGT TCGGCCTGAA CCCGGCGGCG
CGCGCGGTGC TGAATTCGGT GTTCCTGGAC CATGCGGTGC GCGCGGGCAT GACGGCGGCG
ATCGTCCATG TCTCCAAGAT CCGCCCGCTG CACCTGATCC CCGAGGAAGA GGTGAAGGTC
GCCGAAGACC TGATCTTCGA CCGCCGCGAG GAAGGCTACG ACCCGCTGCA GCGCCTGCTG
GAACTGTTCG CGGACCGCAA GGCCAGCGAC GCGGTGAAGA AGACCCGGTC GGACCGCGTG
GACGAACGGC TGAAGGAGCG CATCGTCGAC GGCGACCGCA AGGGGCTGGA AGCCGACCTG
GACGAGGCGA TGCGGACCAT CCCGCCGCTG GACATCATCA ACACCATCCT GCTGGACGGC
ATGAAGGTGG TGGGCGAACT GTTCGGCGCG GGCAAGATGC AACTGCCCTT CGTCCTGCAG
TCGGCCGAAA CGATGAAGGC CGCCGTGGCC CACCTGGAAC CGCACATGGA ACGGGCCGAG
GGCCAGACGC GCGGCACCAT CGTGCTGGCG ACGGTCAAGG GCGACGTGCA CGATATCGGC
AAGAACCTGG TCGACATCAT CCTGACCAAC AACGGCTATC GCGTCGTCAA CCTGGGCATC
AAGGTGCCGG TGGCCGACAT GATCGCCGCC ACCCGCGAAC ACGCGGCCGA CGCGGTGGGC
ATGTCCGGCC TGCTGGTGAA ATCGACCGTG GTGATGCGCG AGAACCTGGA GGAAATGGCC
CGCCAGGGGC TGGACGTCCC GGTGCTGCTG GGCGGTGCCG CGCTGACCCG CAATTATGTC
GAGGAAGACT GTACCGCCGC CTACGGCACC GACGGCCGCG TCGCCTATGC CCGCGACGCG
TTCGACGGGC TGTCGCTGAT GGACCAGGTG GCGCAGGGCG AATTCGACAA CTACCTGGCC
GCCACCCGCG CCCGCCGCGC CGGCAAGGCC ACCCGCGCCC GCCCCCGCGA CATGGAACAG
GCCGACACTC GCGGCTTCGC CCCCGTGGAC GTGGCCGCCG CCCGCGCCCG CCGGGCGCGC
CTGACGCAGG ACGAACCGGC GGTGGAACCG CCCTTCTGGG GCGCGCGGGT CATCGAGGCC
GCGCCGGACG CCGTGCTGCC GTTCCTGAAC GAGCGGTCGC TGTATCAATT CCAGTGGGGC
TTCCGCAAGC AGGGCCGCTC GCTGGACGAT TTCATGGGCT GGGCCCGGCA GGAACTGCGC
CCGGTGCTGC GCCGCATGCT GGCCCTGGCG GCGGAGCAGG ACATCCTGCG CCCCCAGGCG
GCCTACGGCT ACTGGAAGGC CGCCGGCCAG GGCAACGACC TGATCCTGTT CGAAGCCGAC
GGCACCACCG AGGCCGCGCG CTTCACCCTG CCCCGCCAGC CGCGCGAGGA CGGCGAGTGC
ATCGCCGATT TCGTCCGCGA CGTGGATGAC GCCCGGCGCG ACGTGATCGG CCTGCAGGTC
GTGACCGTGG GGCAGAAGGC GTCGGACATG GCGCGCGAAT GGTTCGAGGC CAACCGCTAC
AAGGACTACC TGTACCTGCA CGGCCTGTCG GTCGAAATGG CCGAGGCGAT GGCCGAATAC
ACCCACAAGC GCATCCGCGC CGAACTGGGC TTCGCCGCCG AGGACGACCG CGACATGAAC
AAGCTGTTGC AGCAGGGCTA TCGCGGCTCG CGCTATTCCT TCGGCTACCC CGCCTGCCCC
CGGCTGGAGG ACCAGGACCC CATTCTGAAG CTGCTGGACG CCGAACGGAT CGGCGTCTCG
CTGACCGACG GCTACCAGTT GCACCCCGAG CAATCGACCT CGGCGCTGGT GGTTCTCAAT
CCGAAAGCGA AATATTTTTC GGTCTGA
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| Protein sequence | MTARPHLLDA LRDQVLLCDG GMGSRVQVLD LDVERDYWGQ ENCTEILNLS RPELVREIHR
GYFEAGADMV ETNSFGGTPI TLGEFGLADR AREINRTAAH LAREAAESFA DGRHRYVIGS
VGPGTKLPSL GNIDYDTLEA GLAEQCRGLI DGGVDALLIE TCQDTLQIKA AVNGAKIARA
ELGTDTPIFV QVTVETTGTL LVGPDIAAAA TAIHALDVPL MGLNCATGPQ EMAEHVRWLA
GNWPGLISIQ PNAGLPELVD GQTHYPLSPA DMATWVDRFI TEDGLNLVGG CCGTSTPHIA
ALDAMLRRRA EGTGRHRPAP VPRRPVWIPS VSSLYTQVPL RQENSYFSIG ERCNANGSKK
WRTLQEEGDW DGCVSIGREQ VAEGSNALDL CTAFVGRDEM REMNEVVTRF TSSVNAPLVI
DSTETPVIEA ALKLYGGKAI INSINFEDGE GHATDRMLLA RKFGAAVVAL TIDEVGMAKT
AEDKLRIATR LVEFACDRHG LPQSDLMIDP LTFTIGTGVE DDRKLGLWTL EGIRQIRDRF
PDIQIVLGLS NISFGLNPAA RAVLNSVFLD HAVRAGMTAA IVHVSKIRPL HLIPEEEVKV
AEDLIFDRRE EGYDPLQRLL ELFADRKASD AVKKTRSDRV DERLKERIVD GDRKGLEADL
DEAMRTIPPL DIINTILLDG MKVVGELFGA GKMQLPFVLQ SAETMKAAVA HLEPHMERAE
GQTRGTIVLA TVKGDVHDIG KNLVDIILTN NGYRVVNLGI KVPVADMIAA TREHAADAVG
MSGLLVKSTV VMRENLEEMA RQGLDVPVLL GGAALTRNYV EEDCTAAYGT DGRVAYARDA
FDGLSLMDQV AQGEFDNYLA ATRARRAGKA TRARPRDMEQ ADTRGFAPVD VAAARARRAR
LTQDEPAVEP PFWGARVIEA APDAVLPFLN ERSLYQFQWG FRKQGRSLDD FMGWARQELR
PVLRRMLALA AEQDILRPQA AYGYWKAAGQ GNDLILFEAD GTTEAARFTL PRQPREDGEC
IADFVRDVDD ARRDVIGLQV VTVGQKASDM AREWFEANRY KDYLYLHGLS VEMAEAMAEY
THKRIRAELG FAAEDDRDMN KLLQQGYRGS RYSFGYPACP RLEDQDPILK LLDAERIGVS
LTDGYQLHPE QSTSALVVLN PKAKYFSV
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