Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2745 |
Symbol | |
ID | 6976175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3018961 |
End bp | 3020382 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643392255 |
Product | fumarate lyase |
Protein accession | YP_002277095 |
Protein GI | 209544866 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.632463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0578708 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAACCA GCGTCATCGA CAGCCCCGTT TTCCGGGACC TCTTCACCGA ACCGCGTGTT CGCAAGATCT GGTCGGACTC CGGACGGACC GAGCAGTACC TCGCCGTTGA AGCAGCACTC TCGGAGGTTC AAGGGCGGCT CGGCATTATC CCCGCAGACG CTGCGAAGAA AATTGCGTCC GTTTGCTTGC TCGAGAAGAT CGACATGGTA CGGCTCGCGG ATGAAACGGC AGAGATCGGC TATCCGGTCC TCCCGCTCGT CCACCAGATC CAGTCGCTCG CCGGCGATGC GGGCGACTGG TGCCATTGGG GTGCCACTAC GCAAGACATC ACCGATACCG CTACCGTCCT GCAGATAAAG GCGTCGCTCG ACGTGGTGGC CGATCTGCTC GAACGCTGCA TCGCCGCAGC CTCCGGCCTC GCCCGTGCAC ATCGCGATTT GCCGATGGTG GGGCGCTCGA ACCTACAGCA GGCGGTGCCA ATCACCTTCG GCTTTAAGAT GGCAAGACTG GCCGCTTGCC TGTTACGTCA TCGCGAGCGG TTGGCGGAGC TACGTCCGCG TATTGAGGTT CTGGAGTTCG GCGGCGCCTG CGGGACGCTC GCCTCTCTCG GCGATCGCGG TCTCGATGTC CAGAAAGTCC TCGCCGACAC GCTGGGCCTC GCCCGACCGC CCATCACCTG GCACACGGAT CGCGACTCGA TTGCTGAAAC GGCATGTTTC CTTGGCCTTG TTACCGGGAC GCTGTCAAAG TTCGCTACCG ATCTCAAGAC CATGATGATG ACGGAAGTGA ACGAGGCAGC CGAGCCGTTC GTTCTTAATC GCGGCTCCTC CTCGACCATG CCGCAGAAGC GCAATCCGAT CTCGTGCTGC TACATCACTG CCTGTGCGGC GAGTGTGCGC CAGTCGACCG CAGCCCTTCT CGGCAGCATG GATGCTGACC ATGAGCGCGC GACGGGGCCG TGGGAGATCG AGTGGATCGA ACTGCCGCGT ATATTTTCGC TCGCTAGCGG GGCACTGTCG CAAGCCGCTT TCGTAATCGA GGGGCTTGAG GTGAACGGGG ATCGAATGGC CGCGAACCTC GGTATCACCA AAGGGCTCAT CATGTCGGAA GCTGTCATGA TGGCTCTGGC ACCGAAGATC GGTCGGGGCC AGGCTCACGA CATGCTCTAC AAAGTCTGCC GCGCGGCGCT CGAACAAAAC AGGTCGCTAG CCGAGATGCT AAAGGCGGAC GACGCCGTCA CGGAGCAGCT TTCGCATCGG CAGATCGACC ACCTGACCGA TCCGGCGCGC TATCTCGGCT GTGCCGGAGA GATGATTGAC GCGGTGCTCG CTCATTCGAC AACATCGGAT CATGACCCTA TTACTACTCT CGCAGAAAAT TTGGACGAAG GATTCCCTTC GAGAGCGATC GCTGATTCAT AG
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Protein sequence | MATSVIDSPV FRDLFTEPRV RKIWSDSGRT EQYLAVEAAL SEVQGRLGII PADAAKKIAS VCLLEKIDMV RLADETAEIG YPVLPLVHQI QSLAGDAGDW CHWGATTQDI TDTATVLQIK ASLDVVADLL ERCIAAASGL ARAHRDLPMV GRSNLQQAVP ITFGFKMARL AACLLRHRER LAELRPRIEV LEFGGACGTL ASLGDRGLDV QKVLADTLGL ARPPITWHTD RDSIAETACF LGLVTGTLSK FATDLKTMMM TEVNEAAEPF VLNRGSSSTM PQKRNPISCC YITACAASVR QSTAALLGSM DADHERATGP WEIEWIELPR IFSLASGALS QAAFVIEGLE VNGDRMAANL GITKGLIMSE AVMMALAPKI GRGQAHDMLY KVCRAALEQN RSLAEMLKAD DAVTEQLSHR QIDHLTDPAR YLGCAGEMID AVLAHSTTSD HDPITTLAEN LDEGFPSRAI ADS
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