Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2670 |
Symbol | |
ID | 6976100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 2941156 |
End bp | 2942754 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643392183 |
Product | RND efflux system, outer membrane lipoprotein, NodT family |
Protein accession | YP_002277024 |
Protein GI | 209544795 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0133401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.268883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATAGGG GACATTCTTG GCGGGCGGCG ATCGTCGGGC TGTCGGTCCT TGCGACCGGA TGCGCGGTCG GGCCGGACTT CCACAAGCCC GTGGCCTGGG CGCCGCCGCA CTGGGCGGGC CAGCATTGGG TGGGTTCAGC CCCCGGGTCG ACCTCTGGGG CATCCAGGCC GCCTGTCAGC AGCGATATCT CGGATGCCGC CCCCGACCCC GCATGGTGGG ACGTGTTCCA TGATCCCGAA CTGTCGGCGC TGGAACGCCG GGTGGCCGGG CAGAACCTGT CCGTCGCCAT CGCCACCGCC CGTCTGGCGC AGAGCCGGTC GCAACTGCGG ATTGCCGGGG CCGAGCGTTA TCCGGGGCTG AGCGCCGCGG GGTCGTACAC CCGGTCGCAA TACAGCACCA AGGAATTGCA GCGGATCGTC AGCGATGTCG GCAAGTCCGG CAACCTGCCG CTGGGCGGGG TCAACCTGGC GGACCAGTCC GGGCAGTTCA CCATTCCGCT GCTGGACCAG TGGCGCGACA GCATCGACGC GACGTGGGAG GTCGACCTGT GGGGCCGCGT GCGCCGGCAG TACGAGGCGG CGGGCGCCGA CCTGCAGGCC TCGGTCGAGG AACGGCGCGG CGTGCTGACC GCGCAGATGG CCGAACTGGC CCGCGATTAC GTGGCCCTGC GCGAGGCCCA GGCGCAACTG CGCATCCTGC TGGACAATCG CGACACCGCG TCCCGCTCGC TGGACCTCAG CCGCCAGCGC AACCAGGCGG GCCTGGTCAG CGAACTGGAC GTGCAGAGCG CGCAGTCGCA ACTGGATTCC GTCACCGCGC GCATTCCGCA GATGGAACAG CAGATCGCGC TGCAGGTGAA CGCGCTGAGC CTGCTGCTGG GGGCGCCGCC GTCCGCCCTG GCCGGCGAAC TGCTGACCGA CCGTGACATT CCGCCCGTGC CGCCGCGCGT GCCGGCCGGC GTGCCGTCCG AACTGGCCCG CCGCCGCCCA GACATCCGCC AGGCCGAGGC GCAGCTTCAT GCCGCCACCG CGCAGGTGGG CGAGGCAGTG GCCGAGTTCT ATCCCCGCGT GACCATCGAC GCCGGATTCG GCTTCCAGTC GCTGTCCTTC CGCGATTTCG GATTCTGGAA TGCCCGGGCG TGGAATGTCG GCCCGTCGAT CAGCCTGCCG ATCTTCCAGG GCGGGCGGCT GCGCGGGCAG CTTGAGTTGC GCCACGCGGC GGAGCAGGAG GCCGCGATCA CCTATCGCCG GACCGTGCTG GGCGCCTGGC ACGAGGTCGA CAACGCCCTG ACCGCGTATC GTGACGAACA GATGCGCCAT GACAGCCTGG CGCGGCAGGT GGCCGACGAC CAGCGGTCGC TGGACCTGGC CCGCGACCAG TATCGCCACG GCATGGTGAC GTTCCTGACG GTGCTGGATG CCGAACGCCG GGTGCTGGGG TCGCAGACCG ACCTGACCAG CAGCACGGCC AGCCTGTCGA CCGATCTGGT GCAGCTCTAT TCCGCGCTGG GCGGCGGGTG GGAAAATACC TTCCCGGTCC AGATGGCGGC CCCGGCCCGC CTGGCCGGTG CCGCGCCCGG CGCGGCCCCC CCGGCATGA
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Protein sequence | MHRGHSWRAA IVGLSVLATG CAVGPDFHKP VAWAPPHWAG QHWVGSAPGS TSGASRPPVS SDISDAAPDP AWWDVFHDPE LSALERRVAG QNLSVAIATA RLAQSRSQLR IAGAERYPGL SAAGSYTRSQ YSTKELQRIV SDVGKSGNLP LGGVNLADQS GQFTIPLLDQ WRDSIDATWE VDLWGRVRRQ YEAAGADLQA SVEERRGVLT AQMAELARDY VALREAQAQL RILLDNRDTA SRSLDLSRQR NQAGLVSELD VQSAQSQLDS VTARIPQMEQ QIALQVNALS LLLGAPPSAL AGELLTDRDI PPVPPRVPAG VPSELARRRP DIRQAEAQLH AATAQVGEAV AEFYPRVTID AGFGFQSLSF RDFGFWNARA WNVGPSISLP IFQGGRLRGQ LELRHAAEQE AAITYRRTVL GAWHEVDNAL TAYRDEQMRH DSLARQVADD QRSLDLARDQ YRHGMVTFLT VLDAERRVLG SQTDLTSSTA SLSTDLVQLY SALGGGWENT FPVQMAAPAR LAGAAPGAAP PA
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