| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2638 |
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| Symbol | |
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| ID | 6976068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2906027 |
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| End bp | 2907544 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643392153 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002276994 |
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| Protein GI | 209544765 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.544022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA GACGCACATT CCACCGGGCC GGGCTGATGC TGCTGGCCGC CACGATGCTG
GCGGGGTGCA CGGTGGGGCC GCGCTACCAG CCGGACCGGA TGAAGCTGCC GCCGGGCTTT
GCCGAGGACG AGCATGCCGC GACGCCGGCG GAAATCGCCC GCACCAATGC CGAGCTGAAG
GACTGGTGGC ACCGCTTCGG CGACGCCGAG CTGGACCGGC TGGTTGACCG GGCGATCGCG
GGCAATTACG ACCTGCAGAT CGCCGGCCAG CGCATCCTGG CCGAGCGCGC GCTGCGCGAC
GTCCAGGCCT CCGCCTGGTA TCCGCAGGTC GATGCCAACA CCACCGACGG TGACAGCCGC
TATTCCATCA ACGTGGACAA CTGGCCGCTG CGCCCGGGCA ATCCGGCCAA CCGGCCGGGG
GCGTCGTACC TGTCCTACGG CGTCAGCGCC AGCTGGCAGA TCGACGTGTT CGGCCGCATC
CGCCGCGCGG TCGAGGCCTC GGAACACGCG GTCGAGGAGA ATGTCGAGGA ACGGCGCGCG
GTGCTGATGA CCATGCTGTC GTCGCTGGTC AGCGACTACA TGGTGCTGCG CGACACCCAG
CTGCGGCTGG AGATCTCGAA CCGCAACATC GGGGTGGCGC AGGAAGCCTA CGACCTGACG
CGGCGGCTGT ATCTGGAGGG CGTGGGCAAC ACGCTGCAGA TCGCCCAGGC GAAGGCCGAG
CTGGACGCCC AGCAGGCGGC GCGCGAGCCG CTGCGCACCC ATATCGCGCA GATCACCCAC
GCCATCGACG TGCTGATGGG CCAGGTGCCC GGCACCACCG AGGCCGAGCT GAAGGTGGCG
CAGCCGCTGC CCCAGGTGCC GGACTTCCCG GCGACGGTGC CCTCGATCGT GCTGGGCAAC
CGGCCCGACA TCCGCCGCGC CGAGCGCGCC TATGCCGAGG CGACGGCGCG GATCGGGGTC
GCGGTGGCGC AGATGTATCC GAATTTCGCC ATTCCGCTGA ACTTCAACCC CAACGCGTCG
GCGATGTACC AGGTGTTCGA GGCCGGGGCG CTGAGCTGGC AGTTCTTCAT GCTGGCGTCG
CTGCCGCTGA TGCATGGCGG CAAGCTGACC GGGCAGATCC GCGCCGCCCA GGCGGCGGCG
GAAGCCAGCC GCCTGACCTA CCGCCAGACG GTGCTGGGCG CGTTCCGCGA GGTCGAGGAC
GCGATGGCGG CGTGGCATGA CGACGTGGAG CACACCGAAC TGCTGCACCG CGCCGCCGAG
GACAGCCGGC TGGCCAGCGA CCGGGCGCGC AAGCTGTATG CCGCCGGGCT GGTGGGCTTC
CTGGAGGTGC TGACCACCGA GCGCACCGCC CTGGCCGCCG AGAACGCCGA GGCCGTGGCG
CGGCTGGAGC GCCTGCAGGA CGCCATCGAC CTCTATACCG CCATGGGTGC CGGCTGGCAG
GGCGTGGGGG TGACCGCATC CGCCCTGCCG GTGTCGCTGG AGAAGCAGAA CGTCCTGGCG
CGGGCGTTCC AGGATTGA
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| Protein sequence | MKTRRTFHRA GLMLLAATML AGCTVGPRYQ PDRMKLPPGF AEDEHAATPA EIARTNAELK
DWWHRFGDAE LDRLVDRAIA GNYDLQIAGQ RILAERALRD VQASAWYPQV DANTTDGDSR
YSINVDNWPL RPGNPANRPG ASYLSYGVSA SWQIDVFGRI RRAVEASEHA VEENVEERRA
VLMTMLSSLV SDYMVLRDTQ LRLEISNRNI GVAQEAYDLT RRLYLEGVGN TLQIAQAKAE
LDAQQAAREP LRTHIAQITH AIDVLMGQVP GTTEAELKVA QPLPQVPDFP ATVPSIVLGN
RPDIRRAERA YAEATARIGV AVAQMYPNFA IPLNFNPNAS AMYQVFEAGA LSWQFFMLAS
LPLMHGGKLT GQIRAAQAAA EASRLTYRQT VLGAFREVED AMAAWHDDVE HTELLHRAAE
DSRLASDRAR KLYAAGLVGF LEVLTTERTA LAAENAEAVA RLERLQDAID LYTAMGAGWQ
GVGVTASALP VSLEKQNVLA RAFQD
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