| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2360 |
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| Symbol | |
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| ID | 6975790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2616613 |
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| End bp | 2618424 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643391886 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002276728 |
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| Protein GI | 209544499 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAAGAA TCCTGGATCT TCATAATCGT ATCCTAAAAC AGTTCTTATT CGAAACGACA
TGGCGGGGTA CAGGGCAGGG TCAGGATATC GCCGGCGTAT TGTGTGCCGA GGTCGAACGT
CTTGTGCCGG ACAGCGTGGC GACAGTACTG CGGGTCAATT TGGAGCAGGG GCTCGAAATT
CTCTCGGGCG ACAGTCTTCC GCGCGCGAAA ATCGCTCTGC TGGAACACAT GACCCTGACG
GATGCGGATA TTGCCGCTCT TCGCGCGAAC CCCGAGGAAG CATACAGAAT CGTATGGCGA
CCGGGAGAGG ACGAAACGCA CGACATCGCA TTGTCCGATT GCCGGGCGTC GGCCCTCTTC
GACGGCAGGG GCCAGCTGAT CGGCATCTTC GCCCTGTATT CGCGGCATCG GCACGGCATC
GCGGACTGGG GGGAAAAAAT CGTCTCGCAC TGCCGTTCCT CGTGCGTTGC GATCATCGAA
TACGGCAGAA CCCGCAGGCG GCTGGACCAA ATCGACCGCC ACGACGCGCT GACCGGCCTT
CCGAACCGCG CCGCGATATT CGATCTTTTG CAAAAGATGA CGACGGAAAC GCCAACGTCA
CCATTCGCGC TCATCATCCT GGACGTGGAC CTGTTTCAGG ACTTCAACGA TGCGATGGGG
TACGAACAGG GTGACCGTCT GCTGCAGATC GTGGCCTGCC GATTTTCCAC CCATTGCCGC
GGCGATGCCG TCATCGGCCG TCTCGGCGGA GACAACTTCG CCATCGTCAT TCCCGGAGAA
CAGGACACGG CGGCAAACGA CCTCGCCCGG GATCTCGTCG CAACCCTCCG CAGCCCCATC
CGCATCCGCG GGCAGGACAT CGTCATATCG TGCAGTACAG GCATCGGCAC GTTTCCGGAG
AACGGGACCG AGGTGGAACA GGTCGTCCAT CACGCGCAGA TCGCGCTGCG CGAGGCGAAG
AAGGCCACAC GCGGCAGCGT GCAGAACGCC CCCGCCGCCA CCGGAGATGA CGTCGAGGCC
CGGGTCCTTC TCGGCTCGGC CATGCGCAAG GCCGTCCAGA AATCCGAATT CCGCCTGTTC
TACCAACCGC AGATCTGCAT GGAAAGCGGA ACGATATATG GGGTCGAGGC TCTGGCCCGC
TGGTATCATC CTGCAATGGG GCTCATTCAG CCGTCGCAAT TCATCCCGGT CGCCGAACAG
ACGGGGCAGA TCGAAATCAT CGACAGATGG TCCATGGAAG AAGCGTGTCG GCAGATGGCG
GAATGGGACC GGGCCGGAAT GCGGTTGCCC ACGGTCAGCG TGAACGTCTC TGCCGTCAGT
ATCCGAAACA CCGATCTGCC CCGGCGGATC GCCGCCCTTC TCAAGCGGTA TCGGCTGGAA
CCGCGCCGCC TGACGGTCGA AATTACGGAA AGCGCCATGA TGCAGCAGAG CCGCGACACC
GGGGCGACCC TTTCCGCCAT GCTTGCGATC GGAATAGGCC TGGCGCTCGA TGATTTCGGA
ACCGGCTTTT CCTCCCTGTC GCGCCTGACC CATCTTCCCC TGACGGAAAT CAAGATCGAC
CGCAGCTTCG TCACAAGTCT GGAGCGGGAC GTCGGTTCGA TGATCGTCAC CGAGGCGGCG
ATCACGATCG GAAAGCGACT GGGGGTGAAA GTGGTCACCG AAGGCGTCGA AGAGATCGCG
CAGGTAAGGA AACTGCGTCA ACTGGGCTGC GATGTCGTGC AGGGCTACCT GATCAGCAAG
CCGCTGCCGT CAGCCGAAAT TCCGAACTGG CTGCAATCTC GTGACGGAAC GATCACCGAA
AGTGACGAAT AG
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| Protein sequence | MERILDLHNR ILKQFLFETT WRGTGQGQDI AGVLCAEVER LVPDSVATVL RVNLEQGLEI
LSGDSLPRAK IALLEHMTLT DADIAALRAN PEEAYRIVWR PGEDETHDIA LSDCRASALF
DGRGQLIGIF ALYSRHRHGI ADWGEKIVSH CRSSCVAIIE YGRTRRRLDQ IDRHDALTGL
PNRAAIFDLL QKMTTETPTS PFALIILDVD LFQDFNDAMG YEQGDRLLQI VACRFSTHCR
GDAVIGRLGG DNFAIVIPGE QDTAANDLAR DLVATLRSPI RIRGQDIVIS CSTGIGTFPE
NGTEVEQVVH HAQIALREAK KATRGSVQNA PAATGDDVEA RVLLGSAMRK AVQKSEFRLF
YQPQICMESG TIYGVEALAR WYHPAMGLIQ PSQFIPVAEQ TGQIEIIDRW SMEEACRQMA
EWDRAGMRLP TVSVNVSAVS IRNTDLPRRI AALLKRYRLE PRRLTVEITE SAMMQQSRDT
GATLSAMLAI GIGLALDDFG TGFSSLSRLT HLPLTEIKID RSFVTSLERD VGSMIVTEAA
ITIGKRLGVK VVTEGVEEIA QVRKLRQLGC DVVQGYLISK PLPSAEIPNW LQSRDGTITE
SDE
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