| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2305 |
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| Symbol | |
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| ID | 6975735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2554552 |
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| End bp | 2556105 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643391833 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002276675 |
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| Protein GI | 209544446 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0155955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCCG TTATGCCTGG CAGTAACGCC ATGACGCGTC GTCTTCTCGC AGGCTTCTCC
TGCCTGGCGC TCGTGGGGTG CACGGTCGGG CCGGATTTCC ACAAGCCGCG GGTCACGGCC
GCGTCCGGAT GGCGGTCCAC CCAGCCCCCG GCGGAAAGCC GCGTGACGAC GGCCTCGGTC
GATCCGGCAT GGTGGACGCT CTTCAACGAC CCGATCCTGA CCCGCCTGGA AGCCGAGGTC
GCGGCCTCCA ACCTCGACCT CCGGGCGGCG GGCCTGCGGT TCATGCAAAG CGAGGCCGAG
CGGCGGATCG CCCGCGCGGC CCAGTTTCCG CACGCCGAAG CCAACGCGTC CTATGCCCGC
GAGCGCGCCA GCACCAACGG CATTCTCGGC CTGCTCGGCA CCATGGAGCG CGAAGGGGCC
GGGTCCGTGG CGTCCGGCAC CCAGGGGTTC GGACCGACCG CCCTGCCGGG AAGCGTCGGC
AATCCCTCGT TCAACCTGCC GCAATATGGC ATGAGCGCCT CGTGGGAAGT CGACTTCTGG
GGCCATGTCC GCCGCCAGGT CGAAGCCGCG ACGGCGGCGA TGCACGAGAC CGAGGAGATG
CGCCGCGACA TCCTCGTCTC CCTGATGGCC GAGACCGCGC AGGATTATAT CGACCTGCGC
GCCGTCCAGA CCCAGATCGG CATCCTGAAC CATAATATCG ACGTGGCCGC CAACAGCGTG
AAGCTGACCG GCATGCGCTT CCAGCAGGGC GCGGCGACCC GGCTGGACGT GGCCGAGGCG
ACCGGCCAGC TTCACACCTT CACCTCCCGC CTGGCCCCCC TCAAGGCCCA GGCGACGCAC
CTGCTCAATG CCCTGAGCTT CCTCGTGGCG CGCCAGCCCG GGGCGCTGGA CGCCGAACTG
GGGCCGGCGC GCGACATCCC GTCGGTGCCC GCGACCATTC CCGTCGGGCT GCCGTCCGAA
CTGGCCGAGC GCCGGCCCGA TATCCGCATG GCCGCCGACC GCCTGCACGC GGCGACGGCC
AGCATCGGCG TCGCGATCGC GGACTTCTTC CCCCGGATCA CGCTGTCCGG CAGCCTCGAC
GTCCAGGCGC TGCAGTTCAG CGGCCTGGGG TCCTGGGCGT CGCGCCAGTA CGGGTTCGGC
CCCACCGCGA CGCTGCCGAT CTTCGAGGGC GGCCGCCTGA CGGGGCAGTT GCGCCTGCGC
CGCGCGCAGC AGCAGGAAGC CGCCACGATG TTCCAGCGGA CGGTCCTGAA GGCGTGGCAG
GAAATCGACG ACGCGATGGC CGATTTCACG GCCGCGCAGC AGCGGCGCGA CGAACTGGCC
GAAGCGGTGC GGGAGAACGA AATTGCGGTG GACACGGCCA GGGCGCAATA TGTCCAGGGA
TCGTCGGACT TCCTGAACGT CCTGACCCTG CAGAACGCGC TCCTGTCGTC CCAGAGCGCC
CTGGCCGACG CGACGGCCAC CGTGGCCGGG TCGGTCACCC ACCTCTACCG CGCGGTCGGC
GGGGGATGGG AAGGGCTGTA TCCGGAAAAG CCGAATCACC GGCCCCCTGC GTAG
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| Protein sequence | MMPVMPGSNA MTRRLLAGFS CLALVGCTVG PDFHKPRVTA ASGWRSTQPP AESRVTTASV
DPAWWTLFND PILTRLEAEV AASNLDLRAA GLRFMQSEAE RRIARAAQFP HAEANASYAR
ERASTNGILG LLGTMEREGA GSVASGTQGF GPTALPGSVG NPSFNLPQYG MSASWEVDFW
GHVRRQVEAA TAAMHETEEM RRDILVSLMA ETAQDYIDLR AVQTQIGILN HNIDVAANSV
KLTGMRFQQG AATRLDVAEA TGQLHTFTSR LAPLKAQATH LLNALSFLVA RQPGALDAEL
GPARDIPSVP ATIPVGLPSE LAERRPDIRM AADRLHAATA SIGVAIADFF PRITLSGSLD
VQALQFSGLG SWASRQYGFG PTATLPIFEG GRLTGQLRLR RAQQQEAATM FQRTVLKAWQ
EIDDAMADFT AAQQRRDELA EAVRENEIAV DTARAQYVQG SSDFLNVLTL QNALLSSQSA
LADATATVAG SVTHLYRAVG GGWEGLYPEK PNHRPPA
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