| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1827 |
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| Symbol | |
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| ID | 6975249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 2029890 |
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| End bp | 2030786 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643391352 |
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| Product | squalene synthase HpnD |
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| Protein accession | YP_002276202 |
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| Protein GI | 209543973 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTGA CACGGATACG CACGGCGCGG GCACGGACGG CGGAGCCAGC CCCCCTTGGG
TGTGATCCGG CCGATCTGGC GCAGGTCGAA TCCGTGGTCG TCGCGTCGGG CACGTCGTTC
GGCAAGGGCA TGCGCATCCT GGCGCCCGAC CGGCGCTACG GGATGTATGC CGTCTACGCC
TTCTGCCGCC TAGTCGACGA CGTGGCGGAC GATGACGGCA CGCCCGAGGA CAAGAGCGCG
CTGCTGCGTG CGTGGCACGA ACGGATCGCC GGCCTGTATG CCGGGCGCGC GACGGACGCG
CTGGACCGCG TGCTGTCGGT GGTCATCGCC CGGTTCGACC TGCGGCAGGC CGATTTCGAC
GCGGTGATCG ACGGCATGAT GATGGACGCC CAGGGCCCCA TCGTCGCCCC CGACGAAGCG
ACCTTCGACC TGTATTGCGA CCGCGTGGCC TCGGCGGTGG GGCGCCTGTC GGTGCGGGTG
TTCGGCGATG CGTCGGCCGA GGCCGACCGC GTGGCCTTCC ATCTGGGCCG CGCCCTGCAG
ATCACGAACA TCCTGCGCGA CGTGGCCGAG GACGCCCAGC GCGGCCGGCT GTACCTGCCG
CGCGAATTGC TGACCCGCTT CGACGTGCCG CTGGACGCCG CCCGCGCGGT CCGCGCGCGG
GGGCTGGAGG GCGTGGGCCG CGTGCTGGCC GGCCGGGCGC GCGATCATTT CCGTGCCGCC
CACCGGGCGA TGGCCCGCTG CGACCGCCAC GCGATGCGGC CGGCGCGGCT GATGGGCGCC
ACCTATTCCG CCATCCTGAC CGCGCAGGAA AAGCAGGGCT GGCGCCACCC GGAACGGCGG
GTTTCGCTGT CGCGGCCGCG CAAACTGCTG ATCGCCGCCC GCGCCCTGGT GGGCTAG
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| Protein sequence | MGLTRIRTAR ARTAEPAPLG CDPADLAQVE SVVVASGTSF GKGMRILAPD RRYGMYAVYA
FCRLVDDVAD DDGTPEDKSA LLRAWHERIA GLYAGRATDA LDRVLSVVIA RFDLRQADFD
AVIDGMMMDA QGPIVAPDEA TFDLYCDRVA SAVGRLSVRV FGDASAEADR VAFHLGRALQ
ITNILRDVAE DAQRGRLYLP RELLTRFDVP LDAARAVRAR GLEGVGRVLA GRARDHFRAA
HRAMARCDRH AMRPARLMGA TYSAILTAQE KQGWRHPERR VSLSRPRKLL IAARALVG
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