Gene Gdia_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1632 
Symbol 
ID6975048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1812619 
End bp1813275 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content64% 
IMG OID643391168 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_002276025 
Protein GI209543796 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.98908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCC CGCCCGATAA TGCGACCGAA GACGCGTTGG TTCCCATTTC CGCCTTGCAG 
CATCATCTGT TCTGCCCCAG GCAATGCGCG CTGATCCATG TCGAGCGGAT CTGGGCGGAA
AATGGTGCGA CGGCGGAGGG CCGCATTTTG CACGAACGGG TGGATGACGG CCGTCCCGAT
CGCCGGACAG GCGTACGCAC GGTCCGCGCG CTGACGATAC GGTCGCTGAC GCTGGGTGTC
TTCGGCAAGG CCGATGCAGT GGAATTCCAC GGTGTCGAGA CCGCCGCCGT GCCCTATCCG
GTCGAATACA AGCGCGGCCG CCCCAAGGCC CATCGCGCCG ATGAGGTCCA GCTTTGCGCC
CAGGCCATCT GCCTGGAAGA CATGTTCGGA CATTCCGTGC CGGAGGGCGC GTTGTTTTAC
GGCCAGCCCC GGCGGCGCAC GGTGGTGGTG TTCGATGGTG CCCTGCGTAC GCTGACCGAG
CAAACCGCGC GGAAGGTCCG CGCCATGATC GCGGACTGCC TGACTCCACC GCCTGTCTAC
AAGGCCTCTT GCAATCAATG CTCCCTGCAG CACGCCTGCC AGCCGCGCCG ATTGGAAAAG
CCTCCCTCAA TCGGCCGCTG GTTTGCGACA CAACTGCTGG AAGAAGACAA CGCGTGA
 
Protein sequence
MHAPPDNATE DALVPISALQ HHLFCPRQCA LIHVERIWAE NGATAEGRIL HERVDDGRPD 
RRTGVRTVRA LTIRSLTLGV FGKADAVEFH GVETAAVPYP VEYKRGRPKA HRADEVQLCA
QAICLEDMFG HSVPEGALFY GQPRRRTVVV FDGALRTLTE QTARKVRAMI ADCLTPPPVY
KASCNQCSLQ HACQPRRLEK PPSIGRWFAT QLLEEDNA