| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1398 |
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| Symbol | |
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| ID | 6974806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 1560972 |
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| End bp | 1562426 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643390928 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002275793 |
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| Protein GI | 209543564 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGGA ACAGGCCGTC CATCCTGCCC CTGTCATTGT GCGCGTCCGG GGAAGAAGGC
GACGTCCTGC AGCAGGCGGG ACGATTGGAG GAATCGGAAC AGGCCTATCT GCGCGACCTG
GCGAAACGTC CCGACGATGC GCGCCTGCTG ATCAATTACG GCAGCCTGCT CTGCTCGCTG
GGCCAGTACC AGAGGGCCCA CGACATTCTC ATCCATGCGA TCCGGCTGGC ACCGGACCTG
CCCGAAGGGT GGGGAAATCT CGGCTGTGCC CTGATCTACA TGCAGCAATA TCAGAACGCG
GTCGCCGTCC TGCAAAGCGG CCTGGAGCGC AAGCCGGTCC TGCCGGTCGC CTTCAGCAAT
TTGGGCGTCG CACTGGACAG GCTGGGCCGC CACGACATGG CCCAGATCTT TCACCGCGAA
GCGATCCGGC TGCTGCCGGA CGATGCGAGG CGCCACAGCA ACTATGCCAT ATCCCTTCTG
GCACAGGGGA AATACCCCGA AGGCTTCAGG GAATATGAAT GGCGCTGGAC CACGCTGGAC
ATGCGCGCGC ACCGCCCGGC CACGCCGCAA TGGCAGGGCG AGCCGTTCGA CGGAAAAACC
CTGCTGATCC ATACCGAAGG CGGCTTCGGG GACATGATCC AGTTTTCCCG TTTCATCCCG
CTCGCCGCCC GCCGGGGCGG CCGGGTCGTG ACCGGCGTGC GCAGGGAACT GCTGTCGCTG
CTGCGGGATT CATTTCCCGG CCTGACCTTC GTCCCCCACG ACGAACCCGC GCCGCGTCAC
GACCTGCACT GTTCGGTGCT GAGCCTGCCC CATGCGCTGG GTATCGCAAT GGCCGACATT
CCCGCCGCGT CGGGCTTCCT GCGCGCCGAC CCGCGCAAGG TGCGGCACTG GGCGGCACGG
CTTGGCGCGG AGGGTCCCGC CCCGGCCGGA CCGACCCGCC CGGTGCGGAT CGGGCTGGTC
TGGGCGGGTG CCCCGCATCG CGGGGTGCGG GAATACGAGC AGATCGACAA ACGCCGTTCG
ACGGACCTTG CGACCTTCGC ACCGTTTGCC GCCGTATCGG CCGATTTCGT GTTCTACAGC
CTGCAGATCG GGAACCGGGC CGACCAGGCG CGCACGCCGC CGCCCGGCAT GGTCCTGATC
GACCATACCG GCCTGCTTCA TGAGTTCAGC GACACGGCCG CCCTGGTCGC CAACCTGGAC
CTGGTGATCG CCGTCGATAC GTCCACGGTC CATCTCGCCG CCGGATTGGG CAAGCCCGCC
TGGATGCTGT CCCGCTTCGA CCAGTGCTGG CGCTGGCTGT CCGGCCGGAC GGATTCCCCC
TGGTACGACA GCCTGCACGT CTTCCGCCAG AGCCAGCCCG GCGACTGGTC CGGGCCGGTG
CGGGACATCA CCGCCGCGCT GCATGCGCTG GCCGAGGCGC GTCATGCCGC CCCGTCCGCG
ATCGGGAGGA TCTAG
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| Protein sequence | MHRNRPSILP LSLCASGEEG DVLQQAGRLE ESEQAYLRDL AKRPDDARLL INYGSLLCSL
GQYQRAHDIL IHAIRLAPDL PEGWGNLGCA LIYMQQYQNA VAVLQSGLER KPVLPVAFSN
LGVALDRLGR HDMAQIFHRE AIRLLPDDAR RHSNYAISLL AQGKYPEGFR EYEWRWTTLD
MRAHRPATPQ WQGEPFDGKT LLIHTEGGFG DMIQFSRFIP LAARRGGRVV TGVRRELLSL
LRDSFPGLTF VPHDEPAPRH DLHCSVLSLP HALGIAMADI PAASGFLRAD PRKVRHWAAR
LGAEGPAPAG PTRPVRIGLV WAGAPHRGVR EYEQIDKRRS TDLATFAPFA AVSADFVFYS
LQIGNRADQA RTPPPGMVLI DHTGLLHEFS DTAALVANLD LVIAVDTSTV HLAAGLGKPA
WMLSRFDQCW RWLSGRTDSP WYDSLHVFRQ SQPGDWSGPV RDITAALHAL AEARHAAPSA
IGRI
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