Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_1292 |
Symbol | |
ID | 6974697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 1439379 |
End bp | 1440803 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643390821 |
Product | hopanoid biosynthesis associated radical SAM protein HpnJ |
Protein accession | YP_002275689 |
Protein GI | 209543460 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.118878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAGAA CATTATTCCT GCAACCCCCT TCCTTCGACG GTTTCGATGG CGGCGCCGGG TCGCGCTACC AGGCCAAGCG GGAAATCCGG TCGTTCTGGT ACCCGACCTG GCTGGCGCAG CCCGCCGCCA TGGTCGAAGG CAGCCGCCTG ATCGACGCGC CGCCGGCCCG GATGGGGATG GAGCCGATCC TGGAGGACGT GCGCAACCGC GACCTGGTCA TCATGCATAC CTCGACCCCG TCCTTCGCAT CGGACGTGCG GGTCGCGCAG ATGCTCAAGG ACGCCAACCC GGCGCTGAAG ATCGGCATGG TCGGCGCCAA GGTCGCCGTC CAGGCCGAGG AAAGCCTGCT GAAGGCCGCG CCGGTGGATT TCGTCGCCCG CAACGAATTC GACTTCACGA TCAAGGAAAT CGCCGAAGGC CGCCCGTTTG CCGAGGTCGA CGGCATTTCG TGGCGCAACG AGGACGGCAC GATCGTCCAC AACCGCGACC GCGCCATGAT CGAGAACATG GACAGCCTGC CCTTCGTGAC CGAGGTCTAC AAGCGGGACC TGAAGATCGA GGATTACTTC ATCGGGTACC TGATGCACCC GTACATCTCG ATCTATACCG GCCGTGGCTG CAAGTCGCAT TGCACGTTCT GCCTGTGGCC GCAGACCGTG GGTGGCCATC GCTACCGCAC CCGCAGCCCG GAACACGTGG CTGCCGAAAT CCGGCTGGCG AAGCAGTATT TCCCGCAGGT CAAGGAATTC TTCTTCGACG ACGACACCTT CACCGACGAC CTGCCGCGCG CGGAAGCGAT CGCGAAGGAA CTGGGCAAGA TGGGCGTCAC CTGGTCGTGC AACGCCAAGG CCAACGTGCC GCGCAAGACG CTGGAAGTCC TGAAGGAAAA CGGGCTGCGC CTGCTGCTGG TGGGGTATGA GAGCGGCAAC CAGCAGATCC TGCACAACAT CAAGAAGGGC ATGCGGGTCG AGGTCGCGCG CGAGTTCACG AAGAACTGCC ACGAACTGGG AATCAAGATC CACGGCACCT TCATCCTGGG CCTGCCCGGC GAGACCAAGG AGACGATCCA GGAGACGATC AGGTTCGCCA CCGAGATCAA TCCCCACACG CTGCAGGTCT CGCTGGCCGC GCCCTATCCC GGCACGTTCC TGCACAAGCA GGCGACCGAA AACGGCTGGC TGGACGAAAG CAACGCGGAA CTGATCGACG AGAACGGCGT GCAGATGGCC CCCCTGCACT ACCCGCATCT GTCGCACAGC GAAATCTTCA ACGGCGTCGA GGAATTCTAC CGGAAATTCT ATTTCCGCGC GCCGAAGATC GCCTCGATCG TCGGCGAGAT GGTGCGCAGC CCGCAGATGA TGAAGCGCCG CCTGCGCGAG GGCGTGGAAT TCTTCCAGTT CCTGCGCGAC CGCCGCGCGG CCTGA
|
Protein sequence | MMRTLFLQPP SFDGFDGGAG SRYQAKREIR SFWYPTWLAQ PAAMVEGSRL IDAPPARMGM EPILEDVRNR DLVIMHTSTP SFASDVRVAQ MLKDANPALK IGMVGAKVAV QAEESLLKAA PVDFVARNEF DFTIKEIAEG RPFAEVDGIS WRNEDGTIVH NRDRAMIENM DSLPFVTEVY KRDLKIEDYF IGYLMHPYIS IYTGRGCKSH CTFCLWPQTV GGHRYRTRSP EHVAAEIRLA KQYFPQVKEF FFDDDTFTDD LPRAEAIAKE LGKMGVTWSC NAKANVPRKT LEVLKENGLR LLLVGYESGN QQILHNIKKG MRVEVAREFT KNCHELGIKI HGTFILGLPG ETKETIQETI RFATEINPHT LQVSLAAPYP GTFLHKQATE NGWLDESNAE LIDENGVQMA PLHYPHLSHS EIFNGVEEFY RKFYFRAPKI ASIVGEMVRS PQMMKRRLRE GVEFFQFLRD RRAA
|
| |