Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0993 |
Symbol | |
ID | 6974390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 1116217 |
End bp | 1118403 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643390515 |
Product | helicase, RecD/TraA family |
Protein accession | YP_002275391 |
Protein GI | 209543162 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGAC GCGCCACCGA CTCTTCGCCC ACGGAAGCGC TGGCCGGCCT CGTGGAGCGG GTGACGTTCC ACAATGCCGA GAACGGCTTC TGCGTTCTGC GGGTGAAGGT GCGGGGGCAG CGCGATCTGG TCACTGTTGT CGGCCATGCC GCCATGATCT CGGCGGGCGA GTTCGTGCAG ATGTCGGGCC GCTGGTTCAA CGATCACACC CACGGCCTTC AGTTCAAGGC CGAGTTTCTC AAGGCCAGCC CGCCGACCAC GGTCGAGGGC ATCGAGCGTT ATCTTGGTTC GGGCATGATC CGGGGCATTG GTCCCGTCTA TGCGAAGAAG CTGGTGAAAG CGTTCGGCGA GGCCGTGTTC GATCTGATCG AGCAGGAACC GGGACGGCTG CGGGAGGTGA CGGGCATCGG CCCCAAGCGC GCGGAGCGGA TTGTCGCTGG CTGGGCGGAC CAGAAGATGA TCCGCGAGAT CATGCTGTTC CTGCACAGCA ATGGCGTCGG CACCTCGCGG GCGGTAAGGA TCTTCAAGAC CTATGGTCAG GATGCGGTCC AACTGATCAG CGAGAACCCC TATCGGCTCG CGAAGGACAT CCGGGGGATC GGGTTCAAGA CCGCCGACCA GATCGCCCGG AAGATGGGCA TCGCGCCTGA CGCCATGATC CGGGTGAGGG CCGGGATCTC CTACGCGCTT GGCGAGGCGA TGGATGAAGG GCATTGCGGC CTGCCAGTCG GGGAGCTGCT GACCAGCACT GCCGAACTGC TGGAGGTCGC CACCCCTCTG ATCGAGACGG CCCTCGCGCT GGAGCTGGAA GCGGGCGACG TTATTGTCGA CAGCGTGGGC GAGACGGACT GTATCTTCCT CGCCGGCCTG TACCGCGCGG AGCAGAGCAT CGCGGAGCGA TTGCGCGCCT GCGCCATTGG CCGTCCGCCC TGGCCGGACA TCGACGCTGA AAAGGCCATG TCCTGGGTGG AGGGCAAGAT CGGGCTTGCG CTCGCGCCCA GCCAGCAGGA GGCGGTGCGC CTTGCCCTGC ACAGCAAGGT GCTGGTGATC ACGGGCGGAC CCGGCGTGGG CAAGACAACG CTGGTCAACG CCATCCTCAA GATCGTGACG GCCAAGGGCA CGGATGTGCA GCTCTGCGCG CCGACCGGTC GCGCGGCGAA GCGCCTGTCG GAAAGCACGG GGCTGGAAGG CAAGACCATC CACCGCCTGC TGGAGACGGA TCCGGCCAAT GGCAGTTTCA AACGGGACGA TACCAACCCG CTGACCTGCG ATCTGCTGGT CGTGGACGAG GCCAGCATGG TGGACGTGCT GCTGATGCGC TCCCTGCTGC GCGCGCTGCC CGACAACGCC GCGTTGTTGA TCGTAGGCGA CGTGGACCAG TTGCCTTCTG TCGGGCCGGG GCAGGTGCTG GCCGACATCA TCGGCTCCGA TGCCGTGCCT GTGGTGCGGC TGACCGAGGT GTTCCGCCAG GCGGCACAGA GCCGGATCAT TACCAATGCG CACCGGATCA ACGAGGGCAG GATGCCCGAA CTGAACGCGG AAGAGGGATC GGATTTCTAT TTCGTAGAGG CCGCCGAGCC GGAGATCGGG CTGCGTCGGC TGCTGGCCGT GGTGAAAGAC CGTATCCCGG CGCGGTTCGG GCTGGACCCG GTCCGCGATG TGCAGGTGCT TTGCCCGATG AACCGGGGCG GGCTTGGGGC GCGGTCGCTG AATATCGAAT TGCAGCAGGC GCTGAACCCG CCGGGCGACG TGAAGGTTGA GCGGTTCGGC TGGACCTATG GTCCCGGCGA CAAGGTGATG CAGATCGCCA ATGATTATGA CCGGGACGTC TTCAACGGGG ATCTTGGCGT TATCGATAGG ATCGATGTGG AAGAGGGCGA ACTGACGGTC TCATTCGATG GACGGGAGGT CGTTTACGGC TTTGGAGAAC TGGACGAACT GGTGCTGGCC TACGCGACCA CCATTCACAA GAGCCAGGGA TCGGAATATC CAGCGGTGGT CATCCCCCTG GTGACGCAGC ATTACGCTAT GCTGGCGCGG AACCTGCTCT ATACCGGCGT CACACGCGGG CGGAAGCTCG TCGTGCTCGT GGGGCAGAAG AAGGCGCTGG CCATCGCCGT GCGCAACCAG GGCGGGAGGC GGCGGTGGTC GAAGCTCAGG GAGTGGCTGG CGGGTAGCAT CGCATGA
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Protein sequence | MSGRATDSSP TEALAGLVER VTFHNAENGF CVLRVKVRGQ RDLVTVVGHA AMISAGEFVQ MSGRWFNDHT HGLQFKAEFL KASPPTTVEG IERYLGSGMI RGIGPVYAKK LVKAFGEAVF DLIEQEPGRL REVTGIGPKR AERIVAGWAD QKMIREIMLF LHSNGVGTSR AVRIFKTYGQ DAVQLISENP YRLAKDIRGI GFKTADQIAR KMGIAPDAMI RVRAGISYAL GEAMDEGHCG LPVGELLTST AELLEVATPL IETALALELE AGDVIVDSVG ETDCIFLAGL YRAEQSIAER LRACAIGRPP WPDIDAEKAM SWVEGKIGLA LAPSQQEAVR LALHSKVLVI TGGPGVGKTT LVNAILKIVT AKGTDVQLCA PTGRAAKRLS ESTGLEGKTI HRLLETDPAN GSFKRDDTNP LTCDLLVVDE ASMVDVLLMR SLLRALPDNA ALLIVGDVDQ LPSVGPGQVL ADIIGSDAVP VVRLTEVFRQ AAQSRIITNA HRINEGRMPE LNAEEGSDFY FVEAAEPEIG LRRLLAVVKD RIPARFGLDP VRDVQVLCPM NRGGLGARSL NIELQQALNP PGDVKVERFG WTYGPGDKVM QIANDYDRDV FNGDLGVIDR IDVEEGELTV SFDGREVVYG FGELDELVLA YATTIHKSQG SEYPAVVIPL VTQHYAMLAR NLLYTGVTRG RKLVVLVGQK KALAIAVRNQ GGRRRWSKLR EWLAGSIA
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