Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0976 |
Symbol | |
ID | 6974373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 1100297 |
End bp | 1100968 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643390499 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002275375 |
Protein GI | 209543146 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGCC GGTTTTTCGT GTCCGCCGGC ATGCTGGCCA TGCTCTCGCT GACACTCTCG CCGACCATCG TCCGCGCACA AGATTGGGAC GATCTGGTGC GTCAGGCGGC GGAACGGAAT GCGATCCCGG CAACGTGGGT GCGGGCGGTT CTGCGGGCCG AAAGCGCCGG CGATCCGCAT GCGGTTTCGG GTGCTGGTGC GATGGGGCTG ATGCAGCTCA TGCCCGGCAC CTGGAAGGAG GTCCGGCGCA CGCTCAATCT GGGTGCCGAT CCCTTCGATC CGCGTGACAA TATCGCGGCC GGGGCAGCCT ATCTGCGATG GCTGCACGAC CGCTACGGTG ATGCCGGTTT CCTTGCCGCC TACAATGCCG GACCAACCCG TTACGACGAC TATCTGACGA CTGGCCGACC GCTTCCAGGA GAGACGGTTT CCTACGTGGA ATTCGTCACA CAGCTGATGA AAAAACCATC GTCTGACTTC CAGCTTCCCG TTTCTTTTTT TTCCTTTCCT GCTCGCTCCT GGGTGACGGC CGGGCTCTTC GTTTCCGGCC AGTCCGATGG GTTTCGGACG ACCACTTCAC GTCGTGTCGC TGTTCCCGAG AACCTCTTCG CGGGGCATGT CGGGGAGAGG TCCGGCATCG TCCCACTGAG GGGATCGGAT CAGGTCCAGT GA
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Protein sequence | MRRRFFVSAG MLAMLSLTLS PTIVRAQDWD DLVRQAAERN AIPATWVRAV LRAESAGDPH AVSGAGAMGL MQLMPGTWKE VRRTLNLGAD PFDPRDNIAA GAAYLRWLHD RYGDAGFLAA YNAGPTRYDD YLTTGRPLPG ETVSYVEFVT QLMKKPSSDF QLPVSFFSFP ARSWVTAGLF VSGQSDGFRT TTSRRVAVPE NLFAGHVGER SGIVPLRGSD QVQ
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