Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0968 |
Symbol | |
ID | 6974365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 1092277 |
End bp | 1094277 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643390491 |
Product | conjugal transfer coupling protein TraG |
Protein accession | YP_002275367 |
Protein GI | 209543138 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAGC CGGGAACACG TATCCAGTGG GGGCAGGCGC TGCTGGTCCT GTCCATGATC GTGCTGTCCT GGTGGACGGC GACACAATGG ACGGCCTGGG AACTCGCGTT CCAACCGGAA CTCGGTCAAC CGTGGTTCAC GGTTCTGCAT CGTTGGCCGG TCTACGCTCC GCCGCTTTTT TTCTGGTGGT GGTACGAGTT CGACGCCTAC GCCCCGGCGG TCTTCGCGCG GGGTGCCTGG ATCGCGGGTT CGGGCGGGGT ACTGGCCTTC GCAGCCGCCG TGGCGCTGTC CGTCCACCGC GCCCGCGAGG CGAAGCGCGC CGCGACCTAT GGGTCCGCTC GCTGGGCCGA GGACGCGGAA ATCCGCGCGG CGGGGCTGCT GGGCGAGGAT GGGGTGGTGC TGGGAAAATA CCGCCGGGCC TATCTCCGGC ACGATGGTCC CGAGCATGTC CTGACCTTCG CGCCGACGCG TACGGGTAAG GGTGTAGGCA TGGTGATCCC CACACTTCTG ACCTGGCCGG GCTCGGCCAT CATCCATGAC ATCAAGGGTG AGAACTGGCA GATCACCGCC GGTTTCCGTG CCCGCTTCGG ACGTGTGCTG CTGTTCGACC CCACCAATCC GGCGTCCTCG GCCTACAACC CGCTGCTGGA GGTGCGGCGT GGGGCATCGG AGGTCCGCGA CGTGCAGAAC ATCGCCGATA TTCTGGTCGA TCCGGAGGGT TCGCTGGAGC GGCGTAACCA CTGGGAGAAA ACCTCCCACG CCCTGCTGGT CGGTGCGATC CTGCATGTGC TCTATGCCGA GGAAGACAAG ACCCTCGCCG GGGTGGCGAA ATTCCTTTCC GACCCGAAGC GGTCGATCGA GGCAACTCTG TCCGCCATGA TGCGCACGAA CCATCTGGAC GGGAAGGGGC CGCATCCCGT CGTGGCCTCA ACGGCACGGG AACTGCTCAA CAAATCGGAC AACGAGCGCT CCGGCGTGCT GTCCACCGCC ATGTCGTTTC TCGGCCTCTA CCGCGATCCG GTGGTGGCCA CCGTGACCAG TCGCTGCGAA TGGCGGATCG GCGATCTGCT GGACGGCGAA CGGCCTGTTT CCCTGTATTT CGTCATCCCG CCCTCGGATA TCAGCCGCAC CAAGCCTCTG ATCCGCCTGA TCCTCAACCA GATCGGGCGG CGGCTGACGG AGGATCTGTC CGGTCGGGCG GGGCGGCGTC GCCTGCTGCT GATGCTCGAC GAGTTTCCTG CTCTCGGCAG GCTGGACTTC TTCGAGAGCG CGCTCGCCTT CATGGCGGGC TACGGGATCA AGGCGTTCCT GATCGCGCAG TCCCTTAACC AGATCGACAA GGCGTACGGT CAGAACAACA GTATTCTCGA CAACTGCCAT GTCCGAGTAT CCTTCGCTAC GAACGACGAA CGTACAGCAA AGCGCGTGTC CGACGGTCTG GGTGTGGCCA CCGAGATCCG GTCGCAGAAG AACTATGCCG GCCATCGGCT GTCGCCTTGG CTTGGGCATC TCATGGTCTC GCGCCAGGAG AGCGCGCGGC CCCTGATGAC GGTGGGCGAA GTCATGCAGA TTCCGGCACG GGAGGAGGTG GTCATGGTGG CGGGCTGCCC ACCGATCCGG GCACGGAAGG CGCGATATTT CCGGGATCGC CGCTTCGTCG AGCGCATCCT GCCGCCGCCC GATCCTGCAC AATTGCCACG GCCTGTCCGG CCCGATGACT GGAGTGGTCG TCCGTCTCCT GTCACCCCGC CACCGGAGCA GGTGGGGGCG TCGGCAGCAC CGGATAAACC CGACGACGCC GATAGTGATG AATCCCTCGG CACGGGACGG AAATGGTCGC GTGAGCATGA TCCGACGGAT GTCGGCAAAC ACAAGAAGCG TACAGATCCT GACCTCTTTG GCGAGGAACT GCCACCGGAT CCGGAAGCAC GGGATCGTGC CGACCTGACG CGGATCGGCC GGCAGGCCGG CCTCGACCGT GGCAATGACC TTGGGCTGTG A
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Protein sequence | MDQPGTRIQW GQALLVLSMI VLSWWTATQW TAWELAFQPE LGQPWFTVLH RWPVYAPPLF FWWWYEFDAY APAVFARGAW IAGSGGVLAF AAAVALSVHR AREAKRAATY GSARWAEDAE IRAAGLLGED GVVLGKYRRA YLRHDGPEHV LTFAPTRTGK GVGMVIPTLL TWPGSAIIHD IKGENWQITA GFRARFGRVL LFDPTNPASS AYNPLLEVRR GASEVRDVQN IADILVDPEG SLERRNHWEK TSHALLVGAI LHVLYAEEDK TLAGVAKFLS DPKRSIEATL SAMMRTNHLD GKGPHPVVAS TARELLNKSD NERSGVLSTA MSFLGLYRDP VVATVTSRCE WRIGDLLDGE RPVSLYFVIP PSDISRTKPL IRLILNQIGR RLTEDLSGRA GRRRLLLMLD EFPALGRLDF FESALAFMAG YGIKAFLIAQ SLNQIDKAYG QNNSILDNCH VRVSFATNDE RTAKRVSDGL GVATEIRSQK NYAGHRLSPW LGHLMVSRQE SARPLMTVGE VMQIPAREEV VMVAGCPPIR ARKARYFRDR RFVERILPPP DPAQLPRPVR PDDWSGRPSP VTPPPEQVGA SAAPDKPDDA DSDESLGTGR KWSREHDPTD VGKHKKRTDP DLFGEELPPD PEARDRADLT RIGRQAGLDR GNDLGL
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