| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0688 |
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| Symbol | |
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| ID | 6974085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 781313 |
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| End bp | 782830 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643390217 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002275093 |
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| Protein GI | 209542864 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 84 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.13024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCC GTACCGCCCG GCGTTGGCCG GCCCGGGGGG CAACCCTGAT GTGCGGTGCC
GGCCTGCTGG CCGGCCTGCC GGTCCTGGGC GGCTGCTCCG TGGGGCCGGA CTTCCGGCAC
CCCGCCGCAC CGTCCACCCA TTTCGCCCAG GCGGGGCGCC CCGCCCATAC CGACAGCACG
GCCGACGCGG ACGGCATGGC CCAGACCTTC AACCCCGGCC AGGACATTCC GGGGCAATGG
TGGACCTTGT TTCATTCCCC GGCCCTGGAC CGCCTGGTCC GCCACGCGCT GGACCACAGC
CCGACGCTGG AAGCCGCCAG CCTGGCCCTG CGGGTGGCTC AGGAAAACCG CTCGGCAGCG
GTGGGCGCCC TGTTTCCCAG CATCTCGGCC AGTTTCAACC CGGCCCGGTT CAAGACGTCG
CGCGTCTACT CGCCGGTGCC CAACAACAAT AGCTGGCTGT ATACCGTCCA CACAGCGCAG
TTGAACATTT CCTACCAGCC GGATATCTGG GGCGGCATAC GGCGCGGGAT CGAGTCATCG
TCCGCCCAGC GCGATGCCCT GCGCTACCAG CTTGAGGCCG CGTACCTGAC CCTGACGGGC
GAAGTGGTGC AGGCGGCGGT CGGCTATGCC TCGCTGCGGG CGCAGATCGA CGCCGTGAAG
GACCTGACCG CCGCCCAGCA ACGGATTCTG GATTCCAGTA TCCGCCAGCA GGCACTGGGC
CAGTTGGCGG ATGCCGACGT GGCCATGCAG CGCGCCCAGT TGGCCCAGGA CCAGGCCATG
CTGGTGCCCC TGCAGCAGCA ATTGCAGCAG CAGCACGACC ATATCGCCGC CCTGACCGGC
GACATGCCGG ACGACCCGAC GCCGGATTTC ACGCTGGACG CCTTCACCCT GCCCCAGGAC
CTGCCGGTCA GCCTGCCGGT GCGCCTGATC GACCAGCGCC CCGACATCAA GGTGGCCGAG
GCGAACTGGC ACGCCGCCTG TGCCCAGGTG GGCGTGGCCG TGGCCAACCG CCTGCCCAAC
ATCCAGTTGA GCGCGCAGCC CGGCGTGGCC GCCGCGACCA TCGCGCAATT GTTCACCCCC
GGATACGGCC AGTGGATGCT GGCCGGCATG CTGAGCCAGC CCCTGTTCCA GGGCGGACAG
TTGCTGCATG AGGAACGCGC CGCCCGCGCG GCCTACAAGG AAAGTGCCGC GCAATACCGT
GCGGCGGTCG TGACCGCCGT GCAGGACGTC ACCGACAGCC TGAACGCCGT CCGAGCCGAT
GCCTCGGCCC TGGCGGCCAA TGCCAATGCC GAAAAGGCGG CAGCGCGCAG CCTGGGCATC
ACCCACGCGC GCCTGGGCCT GGGCGATGTC AGCCAGGTCG CGCTGCTGAC CGCCCAGCAG
ACCGAATTGC AGGCCCGCCT GGCCCTGGTC CAGGCCCGCG CCGCCCGCCT GTCCGACACT
GCCGGCCTGT TCCAGGCCCT GGGCGGTGGC TGGTGGAACC GGCAGGATAT CCCGAGCGGC
AAGAAACGGT CGGGCTGA
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| Protein sequence | MTARTARRWP ARGATLMCGA GLLAGLPVLG GCSVGPDFRH PAAPSTHFAQ AGRPAHTDST
ADADGMAQTF NPGQDIPGQW WTLFHSPALD RLVRHALDHS PTLEAASLAL RVAQENRSAA
VGALFPSISA SFNPARFKTS RVYSPVPNNN SWLYTVHTAQ LNISYQPDIW GGIRRGIESS
SAQRDALRYQ LEAAYLTLTG EVVQAAVGYA SLRAQIDAVK DLTAAQQRIL DSSIRQQALG
QLADADVAMQ RAQLAQDQAM LVPLQQQLQQ QHDHIAALTG DMPDDPTPDF TLDAFTLPQD
LPVSLPVRLI DQRPDIKVAE ANWHAACAQV GVAVANRLPN IQLSAQPGVA AATIAQLFTP
GYGQWMLAGM LSQPLFQGGQ LLHEERAARA AYKESAAQYR AAVVTAVQDV TDSLNAVRAD
ASALAANANA EKAAARSLGI THARLGLGDV SQVALLTAQQ TELQARLALV QARAARLSDT
AGLFQALGGG WWNRQDIPSG KKRSG
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