Gene Gdia_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0530 
Symbol 
ID6973926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp583919 
End bp584947 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content69% 
IMG OID643390062 
Productperiplasmic binding protein 
Protein accessionYP_002274939 
Protein GI209542710 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.519305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.848906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGAC ACGATCTGGC TGCCGCAATA TTGGCGGCGG CGGTGGTGGG CGTGTGGCCC 
GCGGCCGGAC GGGCGCGGAC GGTCATGGAT ATGACGGGTC ATGCGGTGAC GTGCCCCGAT
CATCCGGACC GGATCGCCGA CCTGTGGTTT GCCCATAACG AATTGACCAT CATGCTGGGG
GCGGCCGGTC GCATCGCGGT GACGGACGAC CTGCCCGCGG CGCGGCCGTG GATGTATCGC
GTGGCCCCCG CGCTGCACCA GGCGGTGGGG GTGACCAGCC CGGTTCCCAA TACCGAAATG
CTGATGCAGT CCGGGGTGGA CCTGGCGTTC GTTGCCAACG ATTCGCCGGC CGCGGCGTCG
CTGCGCCATG TCGGGCTGCC GGTGGTGCAG GCCGGCTTCA CCGATCTCGC GTCCCTGCTG
CGCGCCGTGG ACCTGACGGC CGATATCCTG GGGGACGCCT CGGCCCATGA CGTGGCGCGG
CGCTATCGCG CCGTGCTGAC GGCGACGGTC GAACGGGTGC GGCAGGCCGT CGCCCCCGTT
CCGCTGTCCG CCCGCCCGCG CGTGCTGCAC GTCAAGTCGC TGGTGCCGCT GACGGTCGAT
GGCGAACATA CCATCATCGA CGAATGGATC ACCCGCGCGG GCGGGCGTAA CGCGGCGACC
GGCCTGACGG GCAACATGCG CCCGGTGTCG ATGGAACAGA TCGCGGCCTG GGACCCGGAC
GTGGTGATCC TGGGCGCCGA CAGCGGCGAT GCGACCGCCG CGCCGGAAGG GTGGGCCGCG
CTGCGCGCCG TGCGCGCCGG GCGTGTCCAT CAAAACCCGG CCGGCGTGTT CCCCTGGGAC
CGCTACGGCA GCGAATTGCC GCTGCAACTC CTCTGGACGG CCCGGACACT CTATCCCGAT
CGGTTTCGTG ATGTCGATAT GGTTTCCGAA ACCATCAAAT TCTATCATGA TTTTTTCGCA
TATGACCTGA AGCCGGACGA TGCGGCCCGC ATCCTGGCCG CGCAACGCCC CGCCGAGGGA
GGGCGGTGA
 
Protein sequence
MGRHDLAAAI LAAAVVGVWP AAGRARTVMD MTGHAVTCPD HPDRIADLWF AHNELTIMLG 
AAGRIAVTDD LPAARPWMYR VAPALHQAVG VTSPVPNTEM LMQSGVDLAF VANDSPAAAS
LRHVGLPVVQ AGFTDLASLL RAVDLTADIL GDASAHDVAR RYRAVLTATV ERVRQAVAPV
PLSARPRVLH VKSLVPLTVD GEHTIIDEWI TRAGGRNAAT GLTGNMRPVS MEQIAAWDPD
VVILGADSGD ATAAPEGWAA LRAVRAGRVH QNPAGVFPWD RYGSELPLQL LWTARTLYPD
RFRDVDMVSE TIKFYHDFFA YDLKPDDAAR ILAAQRPAEG GR