Gene Gdia_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0398 
Symbol 
ID6973792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp436162 
End bp437070 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content68% 
IMG OID643389930 
ProductSMP-30/Gluconolaconase/LRE domain protein 
Protein accessionYP_002274809 
Protein GI209542580 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.993472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGG GACCAATCTG CGGCGCGCCG CGATGCGTCT GGGATCTGCG GGCCACGCTG 
GGCGAGGGGC CCGTCTGGTC CGAGGGCGAG CAGGCACTGT ATTTCGTCGA TATCGTCGGC
CGGGCGATCC ATCGCTACCG GCCGGAAAGC GGCGAGACGA TGACGTGGCT TGCCCCGAAT
CGCCCCGGCT TCCTGGTGCC GTCGAACGAC GGGACCTTCC TGTGCGGCCT GAAGGACGGG
CTGCACCGGT TCGACCCCGC CAGCGGACAT TTCAGCCTGG ACACGCTGGT GGAACCGGAA
TTGCCGGACA ACCGCATCAA TGACGGGCAT GTGGACCGGT TCGGGCGCCT GTGGTTCGGC
ACGATGCACG ACGCCGAAAC CGATCCGACC GGATCGCTCT ATTCCGTCAG CCAGGACCAG
GGACGGTTGC ACGTCCATCG CGAGGACGAG GGATATATCG TCAGCAACGG CCCCGCGCTG
TCGCCCGACG GGCGGACGCT GTACCACAAT CACTCGCCCG CCCGCACCGT CTATGCTTTC
GATGTCGGGT CGGGCGGTGT GCTGTCGAAT CGCCGGGTCT TCGCGACGCT GCAGGGTGGC
TACCCGGACG GGATCGCGGT GGACAGCGCG GGCTTCCTGT GGATCGGGGT GTGGGGCGGC
GGGCGGATCG AGCGCCTGGC CCCCGATGGC ACGCCGGTCG ATCCCATTCC GCTTCCCGCC
CGCAACGTCA CCAAGGTCGC GTTCGGCGGG GCCGACTACC GCACCGTGTT CGTCACCACG
GCGCGCAAGG GCCTGTCGCC CGAGCAACTG GACGCGGAGC CCCTGACCGG CGGACTGTTC
TCGTTCGGCA CCAGCATTCC CGGACAGAAA CAGGCGGTGT TCCCGCTCGA CCGGTCGATC
GTGCTGTAA
 
Protein sequence
MMMGPICGAP RCVWDLRATL GEGPVWSEGE QALYFVDIVG RAIHRYRPES GETMTWLAPN 
RPGFLVPSND GTFLCGLKDG LHRFDPASGH FSLDTLVEPE LPDNRINDGH VDRFGRLWFG
TMHDAETDPT GSLYSVSQDQ GRLHVHREDE GYIVSNGPAL SPDGRTLYHN HSPARTVYAF
DVGSGGVLSN RRVFATLQGG YPDGIAVDSA GFLWIGVWGG GRIERLAPDG TPVDPIPLPA
RNVTKVAFGG ADYRTVFVTT ARKGLSPEQL DAEPLTGGLF SFGTSIPGQK QAVFPLDRSI
VL