| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0367 |
|---|
| Symbol | |
|---|
| ID | 6973761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 406818 |
|---|
| End bp | 407975 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643389899 |
|---|
| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| Protein accession | YP_002274778 |
|---|
| Protein GI | 209542549 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.177638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.238697 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCAG TTACCGTTTT GGGCAGCACC GGCAGCATCG GATGTTCCAC GGTCGATCTG
CTGCTGCAGG CGCCGGAACG GTTCCGGGTC GCGGCCCTGG TCGGGGGCAG CAACGCGCCG
CGCCTGGCCG AGCAGGCGCG GGCCCTGCGC GCCAGCCACG CGGTCATCGC GGACGAAAGC
CGGCTGCCGG AACTGCGGGC CCTGCTGGCC GATGACGGGA TCGCGGTCTC GGGCGGGCGC
CAGGCCGTCA TCGATGCCGC GTCCCAGCCG GTCGACTGGA CCATGGCGGC CATCACCGGG
GCGATCGGGC TGGAACCCAC CCTGGCGGCG GTACGCAACG GCGGCTCGGT CGCCCTGGCG
AACAAGGAGG CCCTGGTCTG CGCGGGCGAC GTCATGCTGC GCGCGGTCCA GCAGGCCGGT
GCCACGCTGC TGCCGGTCGA TTCCGAACAT AATGCGATCT TCCAGTCCAT GGCCGACCGT
CAGGCGGACC AGGTGGAAAA GATCGTGCTG ACGGCCTCGG GCGGCCCGTT CCGCCGTGCC
AGTCTGGCCG AGATGGAAAA GGCGACGCCG GAAGCCGCCC TGCGTCATCC GACCTGGACG
ATGGGGGCCA AGATCACCAT CGATTCGGCC ACGATGTTCA ACAAGGGGCT GGAGGTCATC
GAGGCCGCGC GCCTGTTTTC GCTGACCGAG GACCGGATCG GCGTCGTGGT GCATCCGCAA
TCGGTGGTCC ACGGCCTGGT GCAATATACC GATGGCAGCA TCGTGGCGCA GATGGGGTCG
GCCGATATGC GGATTCCCAT CGCGCACACG CTGGCCTGGC CCTGCCGCAT GGCCACGACC
TCGCCCCGGC TGGACCTGGC GGCCCTGGGA CGGATGGAAT TCGAGGAACC GGACGAAGTG
CGCTTTCCCG CGCTGCGCCT GGCCCGGGAA TCCTTGCGCG CGGGCGGCGC CGCCCCCACT
ATCCTTTCCG CGGCCAATGA AATCGCAGTC GAGGCGTTTC TCGGCTGCGG TATCGGTTTC
CTCGACATCG CGCGCGTGGT CGAATCCGTC ATGCAGGCCA TCGGCCATCA GCCGGCCGAC
ACGCTGGAGG CCGTGCTGCA CTGGGACCAG GAAGCCCGCC GGGCGGCCCG CCTGCGCACG
GCATCACTCG CGGCCTGA
|
|---|
| Protein sequence | MKSVTVLGST GSIGCSTVDL LLQAPERFRV AALVGGSNAP RLAEQARALR ASHAVIADES
RLPELRALLA DDGIAVSGGR QAVIDAASQP VDWTMAAITG AIGLEPTLAA VRNGGSVALA
NKEALVCAGD VMLRAVQQAG ATLLPVDSEH NAIFQSMADR QADQVEKIVL TASGGPFRRA
SLAEMEKATP EAALRHPTWT MGAKITIDSA TMFNKGLEVI EAARLFSLTE DRIGVVVHPQ
SVVHGLVQYT DGSIVAQMGS ADMRIPIAHT LAWPCRMATT SPRLDLAALG RMEFEEPDEV
RFPALRLARE SLRAGGAAPT ILSAANEIAV EAFLGCGIGF LDIARVVESV MQAIGHQPAD
TLEAVLHWDQ EARRAARLRT ASLAA
|
|---|
| |