| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0304 |
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| Symbol | |
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| ID | 6973696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 336501 |
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| End bp | 338441 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643389835 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002274716 |
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| Protein GI | 209542487 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.860081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.111747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAC GGCAGGCGGC CCCCGACGGG CCGGACAGCG CGGCACGGGC CATGGCGCTG
CTTGAAGCCG GGGACCGCGA CGGGGCGCTG GCGCTGCTTC ACGCCGCCCT GTCCGCGCGG
CCCGCGTGCC GGGATGCCGA CGTCCTGCAC GGCATGGCCT GCGTCGCCCG TGCCGCCGGG
CGGCCGGACC TTGCGATCGG GCTGGCGGGC AAGGCCGTCG CGCTGCTGCC GGCGGCGCAT
TTTCACATCA CCCTGGGCTG CGCCCTGCGC GAGCAGGGCC ATGTGGAGGA GGCCCGCGCC
GCGCTGGCGG TGGCCGTACT GCGCGAACCG CGCGACGCGC GCGCCCACGC CGCCCTGGCC
GGCGCGCTGG GTGAACTGGG CCGCTGGGCG GAGGCCGAGG CCAGCCTGCG CGCGGCGCGG
GCCCTGTGTC CCGGTGACAT GGCCCTGCTA CTGGAATGGG CCCGCGCGTG CATCCATGGC
GGGGACCACG CCGCGGCGAC GGCGGAGATC GTGGCCGGGG CGGACCGCTT TGCGCCCGAC
CATGCCGGCG CCCTGCACGG GCTGGCCACC CTACTGGCGG ATCGGGGCCA GCCCGCGGGG
GCCGAGGCGC TGTATCGGCA GATCGTCCGG CTTCTCCCCG ATGACGGGGC GGCCTGGGCC
AATCATGGCG CCGCGCTGTT CGCGCTGAAC CGGCACGAGG ACGCCCGCGT CGCGCTGGAG
CACGCCGCTG CCCTGGCGCC CGGCGTCGCG GAAACGCAGA ACAATCTGGG GCTGGTCCTG
ATGGCGCTGG GTCATCTGCC GCAGGCCCGG ACCGCCCTGG AACGAGCCAG GATTCTGGCG
CCGGGCGATG CGCGGATCGC GGTCAATGCC GCGACCATTC TGGACGAACT GGCCGAGGGG
GATGCGGCCG AGGCCCTGTA CCGCGCCGTC CTGCGCGACC CCATCCTGGC GCGGGAGGCG
GAGGGCGCGC GGGCCCAGTT CAATCTGGGA ACATTGCTGC TGGCGCGTGG CGCGTACGCC
GAGGGATGGC GCCATCTGGA AGCCCGATCC CGCCTGCTGC CACCCATGCG CGGGCAGGGC
GTCGCGGAAT GGGACGGGGC GTCACTGCCG CGCGGGCGCG TGCTGCTATA TGCCGAGCAG
GGGCTGGGTG ACGCGATCCA GTTCCTGCGC TACCTGCCCG ACTGCCTGCG CCGCGCGTCC
GTTGTGCTGG ATGTGCCGCA CAGCCTGCAC CGGCTGTTGC AAACGATGCC CGATCCGGAC
GGGCAGATCG CGACGCGGTG CACCGTCCTG CCGCCAGGGG ACCCGCTGCC GGACGATGTG
GTGGCGCGCT GCGGCCTGAT CAGCCTGCCG CATCGGCTGG GCATGACCGA TATTCCGCCC
TTCGCGCCCT ATCTGCTGCC GGCACCCGCG CCCGACCTGG GGGAGAGGCC CCGGGTAGGG
TTGTGCTGGG CGGGCAATCC GTCCTTCCGC TTCGATCGAA GGCGGTCGAT CCCGGCGCAT
CGGCTGGCCC CACTGGCCGA CGTGCCGGGC CTGTTTTTCG TCAGCCTCCA GCACGGTCCG
GCCGCCGCCG CGCCGCCCTT CGCGCTGGAG CGGTCAGCGG AAGGCGACAT GCTGGACACC
GCCCGGATCG TCGCCGGACT GGATCTGGTG ATCACCGTCG ATACCGCCAT CGCCCATCTG
GCCGGCGCGA TGGGCAGACC AGTCTGGCTG CTGAACCGCT TCGGCGGCGA CTGGCGCTGG
TCCGCCACCT TCGACCGTGC CGAGCCCCCG CGCTGGGGCG ACCGGGGCAG CCGCTGGTAT
CCTTCTCTGG AACAGTTCCG CCAGCACCAG CCGGACGATC CCGACACCGC CTGGGCCGCG
CCGATCGAGG CCGTGCACGC GGCGTTGCTT CGCTGGCGGG TTGGTTTCGC CACGGGGCCT
CTTGCGGATA AATCCGCGTA G
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| Protein sequence | MDKRQAAPDG PDSAARAMAL LEAGDRDGAL ALLHAALSAR PACRDADVLH GMACVARAAG
RPDLAIGLAG KAVALLPAAH FHITLGCALR EQGHVEEARA ALAVAVLREP RDARAHAALA
GALGELGRWA EAEASLRAAR ALCPGDMALL LEWARACIHG GDHAAATAEI VAGADRFAPD
HAGALHGLAT LLADRGQPAG AEALYRQIVR LLPDDGAAWA NHGAALFALN RHEDARVALE
HAAALAPGVA ETQNNLGLVL MALGHLPQAR TALERARILA PGDARIAVNA ATILDELAEG
DAAEALYRAV LRDPILAREA EGARAQFNLG TLLLARGAYA EGWRHLEARS RLLPPMRGQG
VAEWDGASLP RGRVLLYAEQ GLGDAIQFLR YLPDCLRRAS VVLDVPHSLH RLLQTMPDPD
GQIATRCTVL PPGDPLPDDV VARCGLISLP HRLGMTDIPP FAPYLLPAPA PDLGERPRVG
LCWAGNPSFR FDRRRSIPAH RLAPLADVPG LFFVSLQHGP AAAAPPFALE RSAEGDMLDT
ARIVAGLDLV ITVDTAIAHL AGAMGRPVWL LNRFGGDWRW SATFDRAEPP RWGDRGSRWY
PSLEQFRQHQ PDDPDTAWAA PIEAVHAALL RWRVGFATGP LADKSA
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