Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0135 |
Symbol | ispG |
ID | 6973527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 149294 |
End bp | 150442 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643389669 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_002274550 |
Protein GI | 209542321 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.23401 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCT ATCGTCCCTA TCAGTCCATC GAGCGCCGCA AGTCGCGGCA GATCCATGTC GGCAAGGTTC CGGTCGGCGG CGACGCACCC ATTTCGGTGC AGACCATGAC CAATACCCTG ACGACGGATG CCGAAGCGAC GATCGCGCAG ATCCGCAGGG CCGAACTGGC GGGCGTCGAT ATCGTGCGCG TCTCCTGCCC CGACGAGGAA AGCACCGCCG CGCTGGCCGA GATCGTGCGC GAGGTCAACG TGCCGATCGT TGCCGACATC CATTTCCACT ACAAGCGCGC GATCGAGGCC GCCCAGGCCG GCGCGGCCTG CCTGCGCATC AATCCCGGCA ATATCGGCAG CGCCGAGCGT GTGCGTGAGG TCGTGAAGGC CGCGCGTGAG CATGGCTGCT CGATCCGCAT CGGGGTGAAT GCCGGGTCGC TGGAAAAGCA CCTGCTGGAA AAATACGGCG AACCCAACCC CGACGCGCTG GTCGAAAGTG CGCTGGAACA CGCCAAGATC CTGCAGGATC ACGATTTCCA TGAATTCAAG ATCAGCGTGA AGGCGTCGGA CGTCTTCCTG GCCGTGGCCG CCTACCAGCA ACTGGCCGAG GTCTGCGACC ATCCGCTGCA TATCGGCATC ACCGAGGCGG GCAGCAAGCG CGCCGGCACG GTCAAGTCCT CGATCGGCCT GGGCAACCTG CTGTGGGCCG GCGTGGGCGA TACCATGCGC GTCTCGCTGT CGGCGGACCC CGAGGAAGAG GTCCTGGTGG GCTGGGATAT CCTGAAATCC CTGGGCCTGC GCCATCGCGG CGTGAAGATC ATTTCCTGCC CCTCATGCGC GCGGCAGGGG TTCAACGTCA TCCAGACCGT GCAGACCCTG GAGGAGCGCC TGGCGCACAT CCAGACGCCG CTGACGCTGT CCATCATCGG CTGCGTGGTC AACGGCCCCG GCGAGGCGCT GATGACCGAT ATCGGCGTGA CCGGCGGCGG ATCGGGCCGC CACATGGTCT ACGCCGCCGG CCGTCAGGAC CATACCGTTC CGGCCGATTC GATGATCGAG CACATCGTCG AGCTGGTCGA GAAGAAGGCC GAGATCCTCC GTGCCGAGGA AGCGGCCGCC AAGGCCGAGG CCGAAGCGGC GCTGGCCCCC GCGCAATAA
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Protein sequence | MSSYRPYQSI ERRKSRQIHV GKVPVGGDAP ISVQTMTNTL TTDAEATIAQ IRRAELAGVD IVRVSCPDEE STAALAEIVR EVNVPIVADI HFHYKRAIEA AQAGAACLRI NPGNIGSAER VREVVKAARE HGCSIRIGVN AGSLEKHLLE KYGEPNPDAL VESALEHAKI LQDHDFHEFK ISVKASDVFL AVAAYQQLAE VCDHPLHIGI TEAGSKRAGT VKSSIGLGNL LWAGVGDTMR VSLSADPEEE VLVGWDILKS LGLRHRGVKI ISCPSCARQG FNVIQTVQTL EERLAHIQTP LTLSIIGCVV NGPGEALMTD IGVTGGGSGR HMVYAAGRQD HTVPADSMIE HIVELVEKKA EILRAEEAAA KAEAEAALAP AQ
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