| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0114 |
|---|
| Symbol | |
|---|
| ID | 6973505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 129092 |
|---|
| End bp | 130534 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643389647 |
|---|
| Product | Pyridoxal-dependent decarboxylase |
|---|
| Protein accession | YP_002274529 |
|---|
| Protein GI | 209542300 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.15522 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0242531 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAC TGGACCCCGA CAACTGGGAC GACCTGCGGA GCCTGGGGCA CCGCATGGTG
GATGACATGA TCGACCGGCT GGCGACCCTG CGTGACGGGC CGGTCTGGCG CCCGATGCCG
CCGGAAATCC GTACCGCCCT GCATACCGAC CTGCCGGCCG CCCCGACGCC GCCCGAAGCG
CTGTACGACC GGTTTCGCGA CCAGATCGCC CCCTATGCCA CCGGCAACAC CCATCCGGGC
TTCATGGGCT GGGTCCATGG CGGCGGGACG GGGGTGGGGA TGCTGGCCGA ACTGCTGGCC
GGCGGGCTGA ACGCCAATTG CGGCGGCCGC GACCACGCGC CGGTCGAAAT CGAGCGTACG
GTCATCGGCT GGGCCGCCGA GATCATGGGC TTTCCCGCCG ATGCGACGGG CGTGCTGGTC
ACCGGGTCCT CGATGGCCAA CATGATCGCC GTCATCACCG CCAGCCGCGC GGTCGCGGAC
GGCATCACCC TGCGGCAGCG CGGCGTCGGC GGCCGGCAAC TGGTCGGCTA TGCCGCCGCC
ACCGCCCATG GCTGCATCGC CCGCGCCTTC GACCTGGCGG GACTGGGGAC CGACGCGCTG
CGCATCATCC CCGTGGATTC GACCCATCGC ATGGATATCC AGGCCCTGCG CGCCGCCGTG
GAATCCGACC GGCAGCAGGG TTTCGAGCCG TTCATCGTCA TCGGCACCGC CGGGACGGTC
GATACCGGTT CGATCGACGA CCTGGGCGCC ATCGCCGACA TCGCGGGGCA AGAGGACATC
TGGTTCCACG TCGACGGCGC CTTCGGCGCG CTGGCCATGC TGTCCCGCAC GCTGCGCCCG
CATCTGCGCG GCCTGGATCG CGCGGACAGC CTGGCATTCG ATTTTCACAA ATGGGCCCAG
GTGCCGTACG ATGCCGGTTG CATCCTGGTG CGCGAACCCG GGCGCCAGGC GGCGGCCTTC
GCGCAATCGC TGGCCTATCT GTCGCGCGAG GACCGGGGCC TGGCGGGCAA CGCGCCCTGG
TTCTGCGACC TGGGGCCGGA CCTGTCGCGC GGCTTTCGTG CCCTGAAGGT CTGGATGACG
CTGGGCACCT ACGGCACCGT CCGCCTGGGG CAGATGGTCG ACGAATGCTG CGCCGTCGCG
GCCCATCTGG CCCGGCGCGT GGATCGCGAG CCGCTGCTGG AACGCCTGGC ACCGGTCGGG
CTGAACATCG TCTGCTTTCG CGTGCGCGTT CCGGACGTGG AGTTGGACTG GCTGAACGGC
GAACTGGTCA AGGACCTGCA CGAATCCGGC ATCGCCGCGC CCTCCACGAC GATGGTGGGT
GGGGTGAAGG CCATTCGCGC CGCGATCGTC AATCACCGCA CCGTGGCGGC GGATGTCGAC
CTTATGGTCG ATGCGGTGCT GCGGCTGGCC CAGGAAAGGC AAGGGCTCGG CCAAAGGGCC
TAG
|
|---|
| Protein sequence | MTGLDPDNWD DLRSLGHRMV DDMIDRLATL RDGPVWRPMP PEIRTALHTD LPAAPTPPEA
LYDRFRDQIA PYATGNTHPG FMGWVHGGGT GVGMLAELLA GGLNANCGGR DHAPVEIERT
VIGWAAEIMG FPADATGVLV TGSSMANMIA VITASRAVAD GITLRQRGVG GRQLVGYAAA
TAHGCIARAF DLAGLGTDAL RIIPVDSTHR MDIQALRAAV ESDRQQGFEP FIVIGTAGTV
DTGSIDDLGA IADIAGQEDI WFHVDGAFGA LAMLSRTLRP HLRGLDRADS LAFDFHKWAQ
VPYDAGCILV REPGRQAAAF AQSLAYLSRE DRGLAGNAPW FCDLGPDLSR GFRALKVWMT
LGTYGTVRLG QMVDECCAVA AHLARRVDRE PLLERLAPVG LNIVCFRVRV PDVELDWLNG
ELVKDLHESG IAAPSTTMVG GVKAIRAAIV NHRTVAADVD LMVDAVLRLA QERQGLGQRA
|
|---|
| |