| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0063 |
|---|
| Symbol | |
|---|
| ID | 6973452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 68092 |
|---|
| End bp | 69612 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643389596 |
|---|
| Product | succinate CoA transferase |
|---|
| Protein accession | YP_002274480 |
|---|
| Protein GI | 209542251 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0427] Acetyl-CoA hydrolase |
|---|
| TIGRFAM ID | [TIGR03458] succinate CoA transferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0034824 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATC ATAACCGAAT CCGGAATGCG GCCTTCCGGG CAAAAGTCAC GACTGCCGAG
GAAGCTGCCT ACTACATCCG TCCCGGTTCC ATGGTCGGCA TGAGCGGCTT TACCGGTTCG
GGCTATCCGA AAGCCGTGCC GCAGGCACTG GCCGCGATCA TGGAAGCCGA GAAGGCGAAG
GGAAATTCGT TCCGCATCCG CCTGTTCACG GGCGCGTCCA CCGGTCCGGA ACTGGATGGC
GCGCTGGCCA AGGCGGACGG CATCGCGTTC CGCATGCCCT ATAATTCCGA CGCCACGCTG
CGCGGCCGGA TCAACAAGGG CGAAACCGAA TATCTGGACA TGCATCTGAG CCACGTGGCG
CCGATGGTGT GGCAGGGCTT CTTCGGCGAG ATGGACACCG CGGTCATCGA GGCCGTGGCG
ATCCGCGAGG ACGGCACGAT CGTCCCGTCC TCGTCCGTCG GCAACAACAA GACGTGGCTG
GAATCGGCAC GCCAGGTCAT CATCGAGGTC AATAGCTGGC AGGACGCGGC GCTGGAGGGG
ATGCACGACA TCTGGTACGG CGCGGCCCTG CCGCCCGAGC GCCAGCCCAT TCCCCTGCTG
CGCCCGGATG ACAGGATCGG CCAGGCGACC CTGCGCGTCG ATCCGTCCAA GGTCGTGGCG
GTGGTCGAAA CCCATGCGCC GGACCGCAAC GCCCCGTTCA CGCCGCCCGA TGCCTCGGCC
AAGGCCATTG CCGGCCACCT GATGGAATTC TTCCGCCACG AGGTCGCGCG CGGCCGCCTG
CCGCAATCGC TGCTGCCGCT GCAGTCCGGC GTGGGCAATG TAGCCAACGC GGTCATGAGC
GGCCTGGAAG AGGGTCCGTT CGAGGACCTG ACCGCCTTCA CCGAAGTGAT CCAGGACGGC
ATGCTGGGCA TGCTGGAATC CGGCAAGATG CGCGTCGCGT CGGCCACGGC GTTCTCGCTG
AGCCCCGAGG CCGCGGAATC GCTGAATGCC CGGATGGCCG AATTCCGGTC CAAGATCATC
CTGCGGCCGC AGGATATCAG CAACCATCCC GAACTGATCC GCCGCCTGGG CTGCATCGCG
ATGAACGGGC TGATCGAATC CGACATCTAC GGCAACGTCA ATTCGACCCA GATCATGGGC
TCGCGCATCC AGAACGGCAT CGGCGGTTCG GGCGATTTCG CGCGCAACGC CTATATCTCG
GTCTTCATGA CGCCTTCGAC GGCCAAGGGC GGCAAGATCT CGGCCATCGT GCCGATGGCG
TCGCACGTCG ATCACATCAC GCAGGATTCG CAGGTGCTGG TGACGGAACA GGGCCTGGCC
GACCTGCGCG GCCTGTCGCC CAAGCAGCGC GCCGAAGTGA TCATCAAGAA CTGCGCGCAT
CCGGATTACC GTCCGGGGCT GCAGGATTAC TTCAAGCGGG CGAAGGAAGG GTCCTACGGC
CTGCAATCGC CGCATCTGCT GACCGAATCG CTGTCCTGGC ATCAGCGCTT CATCGAAACC
GGCTCGATGC TGCCGACCTG A
|
|---|
| Protein sequence | MIDHNRIRNA AFRAKVTTAE EAAYYIRPGS MVGMSGFTGS GYPKAVPQAL AAIMEAEKAK
GNSFRIRLFT GASTGPELDG ALAKADGIAF RMPYNSDATL RGRINKGETE YLDMHLSHVA
PMVWQGFFGE MDTAVIEAVA IREDGTIVPS SSVGNNKTWL ESARQVIIEV NSWQDAALEG
MHDIWYGAAL PPERQPIPLL RPDDRIGQAT LRVDPSKVVA VVETHAPDRN APFTPPDASA
KAIAGHLMEF FRHEVARGRL PQSLLPLQSG VGNVANAVMS GLEEGPFEDL TAFTEVIQDG
MLGMLESGKM RVASATAFSL SPEAAESLNA RMAEFRSKII LRPQDISNHP ELIRRLGCIA
MNGLIESDIY GNVNSTQIMG SRIQNGIGGS GDFARNAYIS VFMTPSTAKG GKISAIVPMA
SHVDHITQDS QVLVTEQGLA DLRGLSPKQR AEVIIKNCAH PDYRPGLQDY FKRAKEGSYG
LQSPHLLTES LSWHQRFIET GSMLPT
|
|---|
| |