Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0051 |
Symbol | |
ID | 6973440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 56971 |
End bp | 58968 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643389584 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_002274468 |
Protein GI | 209542239 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.294579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0590626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTGG ACGACGTATC CGGAACTGTG TCTGATCATT CCGCCGGCGA GCGAGACCTG TTCCAGGACC GCGACCCCGC CCAGTCATCA GGCCAGCCCT CCAGCCAGCA ATCTTCCACC CCGCAGTCCC CCGCCCAGAT GCAGGACATG TTCGACGATG TCGTGCAGTT GCCCGGCCAT CATCCGGTTC GGGTGAACCG GTCGCGCGAC GCGCTGCTGA CGCCGTTCGG CAAGGCGACG CTGGATAACC GCTACCTGCT GGAAGGCGAG AGCTATCAGG ACCTGTTCGG CCGTGTCTCG TCCTATTACG GCGCCGATCC GGGCCACGCG CAGCGGCTGT ACGACTATAT GTCGCGCCAC TGGTTCATGC CGGCCACGCC GGTCCTGTCC AATGGCGGCA CCACGCGCGG CCTGCCGATT TCCTGCTTCC TGAACGAGGC GAACGACAGC CTGCGCGGCA TCGTCGACCT GTGGAACGAG AATGTGTGGC TGGCCAGCAA GGGCGGCGGC ATCGGCTCGT ACTGGGGCAA CCTGCGCTCG ATCGGCGAGA ATGTGGGCCG CAACGGCAAG ACGTCGGGTG TCATTCCGTT CATTCGCGTC ATGGACAGCC TGACGCTGGC GATCAGCCAG GGGTCGCTGC GGCGCGGCTC GGCCGCCGTC TACCTGCCGG TCTGGCATCC CGAGATCGAG GAATTCATCG AACTGCGCCG TCCGACCGGC GGCGATCCGA ACCGCAAGGC GCTGAACCTG CATCACGGCG TTCTGGTGTC CGACGCGTTC ATGCGCGCGG TGGCCGAGGA CGGGGAATGG GCTCTGCTGT CGCCCAAGGA CGGCGCGCAT ATCCGCAAGA TTTCGGCGCG GTCGCTGTGG ATTCGCATCC TGACGGCGCG GATGGAGCAG GGCGAGCCCT ACATCATCTA TTCCGACCAT GTGAACAACG CGCGGCCGGA ACACCACAAG ATGGCGGGGC TGGAGGTCAA GACCTCGAAC CTGTGCGCGG AAATCACCCT GCCGACCGGC ATGGACCATC ACGGCAACGA ACGAACCGCC GTCTGCTGCC TGTCGTCGCT GAACCTGGAA ACCTGGGACG AGTGGAAGGA CGATCCGCGC TTCATCGAAG ACGTGATGCT GTTCCTGGAC AACGTGCTGC AGGATTTCAT CGACCGCGCC CCCGATGACA TGGAGCGCGC GAAATACGCG GCGTCGCGCG AACGGTCGGT CGGGTTGGGG GTGATGGGGT TCCATTCCTT CCTGCAGGCG AACAACATTC CCTTCGAAAG CGTGATCGCC AAGGTCTGGA ACAAGCGGAT CTTCAAGCAT ATCCGCGAAC AGGCGGACCT TGCCTCGCGC AAGCTGGCCG AACTGCGCGG TCCGTGCCCG GATGCGGCGG AATACGGCTT CATGGAACGG TTTTCCAACA AGCTGGCCAT TGCGCCCACG GCGTCGATCT CGATCATCGC CGGCAATGCC AGCCCGGGGA TCGAGCCGAT CGCGGCCAAC GTGTTCCTGC AGAAGACCCT TTCGGGATCG TTCACCGTGC GCAACCGGCA CCTGCTGAAG CTGCTGATCG ACAAGGGACA GAATACCGAA GAGGTCTGGT CGTCGATCAC CCTGACCAAG GGCAGCGTGC AGCATCTGGA TTTCCTGACC CAGCAGGAAA AGGACGTGTT CAAGACCGCC TTCGAACTCG ACCAGCGCTG GGTGGTCGAG CATGCGGCCG ACCGGGCGGG CTATATCTGC CAGGCCCAGT CGATCAACCT GTTCCTGCCG GCGGACGTGC ATAAGCGCGA CCTGCACCAG ATCCATTATC TGGCGTGGAA GCGGGGGGTG AAGTCGCTGT ACTATTGCCG TTCGCTGTCC ATCCAGCGGG CGGACACGGT CAGCAACGTG CTGGGCAAGG TTGATGTCAT GGCCGACGAA CCTTCCGCTC CTGCTCCCGC TCCCGCCAGC CCGCCGGCAT CTTCCAACAA TTACGACGAA TGCCTGGCCT GCCAGTGA
|
Protein sequence | MTLDDVSGTV SDHSAGERDL FQDRDPAQSS GQPSSQQSST PQSPAQMQDM FDDVVQLPGH HPVRVNRSRD ALLTPFGKAT LDNRYLLEGE SYQDLFGRVS SYYGADPGHA QRLYDYMSRH WFMPATPVLS NGGTTRGLPI SCFLNEANDS LRGIVDLWNE NVWLASKGGG IGSYWGNLRS IGENVGRNGK TSGVIPFIRV MDSLTLAISQ GSLRRGSAAV YLPVWHPEIE EFIELRRPTG GDPNRKALNL HHGVLVSDAF MRAVAEDGEW ALLSPKDGAH IRKISARSLW IRILTARMEQ GEPYIIYSDH VNNARPEHHK MAGLEVKTSN LCAEITLPTG MDHHGNERTA VCCLSSLNLE TWDEWKDDPR FIEDVMLFLD NVLQDFIDRA PDDMERAKYA ASRERSVGLG VMGFHSFLQA NNIPFESVIA KVWNKRIFKH IREQADLASR KLAELRGPCP DAAEYGFMER FSNKLAIAPT ASISIIAGNA SPGIEPIAAN VFLQKTLSGS FTVRNRHLLK LLIDKGQNTE EVWSSITLTK GSVQHLDFLT QQEKDVFKTA FELDQRWVVE HAADRAGYIC QAQSINLFLP ADVHKRDLHQ IHYLAWKRGV KSLYYCRSLS IQRADTVSNV LGKVDVMADE PSAPAPAPAS PPASSNNYDE CLACQ
|
| |