Gene Gdia_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0026 
Symbol 
ID6973415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp30279 
End bp31520 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content69% 
IMG OID643389559 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_002274443 
Protein GI209542214 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.763858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0451598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGGA CGGCCTCGCT GGCCGCCACC GGTTCTCTTG CGGTTGCGGC GCCGCGCCGG 
CACCACGCGC ATGGCGCGCC GTCCCCCCAG CCCGCCCCGA CCGGCGGAGC GAATGCGGAG
GACGGCACCG ATGCCGCCGA CGCGGCGGCC CCCGCCGGGC CGCCGGCCGC CACCCCCATC
GGTCCGCTGG ACACCGTGGC GCGCTGGGCC TGCATCCTGG ACGTCACGAC CGGATCGGTC
CTGCTGGAAA AGGCGGCGGA CGAGCGGATG CCGCCGTCCT CGCTGACCAA GATGATGACG
GCCTATATCG TCTTCGGCAT GCTGAAATCC GGCCGACTGA AGCTGGACCA GATGCTGCCG
GTCAGCGAGA AGGCGTGGCG TATGCAGGGG TCCAAGATGT TCGTGCCCCT GGGGCAGAGC
ATCGCGGTCC AGGACCTGAT CCAGGGCATG GTCATCCAGT CGGGCAACGA CGCGTGCATC
GTGCTGGCCG AAGGCGTGGC GGGGTCCGAG GAACAGTTCG TCGCCCAGAT GAACGACATG
GCGGCGCGTA TCGGCCTGTC CAATTCGCAT TTCATGAACG CCACCGGCTG GCCGGCCGAC
AATCACTACA TGTCGGCGCG CGACGTCGCG CAACTGGCGG TACGGCTGAT CCGCGACTTC
CCGGAATATT ATCACTTCTT TTCCGAGAAG GATTACCGGT TCAACAAGAT CTCGCAGGGC
AACCGCAACG TGCTGGTGGA CAAGGGGCTG GCCGACGGGC TGAAGACCGG CCACACCGAT
GCCGGCGGGT TCGGGCTGTG CGCCAGCGCC GACCGGGGCG GCAACCGGGT GGTCCTGTCG
CTGAACGGCA TGCCGTCCAG CAACGCCCGC GCGCATGAAG GCGAGCGCCT GCTGGAATGG
TCGTTCGCGA ATTTCGAGAA CGCGACCCTG TTCCGCAAGG GCGACATCGT CGAACAGGCA
TCGGTGTGGC TGGGCACGCA GCCCACCGTG CCCCTGGTCG CCACGCGGGA TATCGTCATG
ACCCTGCCGC ATGGCTGGCG GTCGCGGGCG CATATCGGGG TGGATTACCA GGCCCCGGTG
GCCGCCCCCG TGGCGGCAGG GCAGGTGCTG GGCGACCTGG TGATCAGCAA TCCGGGCCTG
GCCGATATCC GCATGCCCCT GGTGGCGGGG CAGGGCGTGC CGCGCCTGGG CCTGTTCGCC
CGGGCGTCGG CGGTGCTGGG CCAGAAACTG GGCCGGCACT GA
 
Protein sequence
MAGTASLAAT GSLAVAAPRR HHAHGAPSPQ PAPTGGANAE DGTDAADAAA PAGPPAATPI 
GPLDTVARWA CILDVTTGSV LLEKAADERM PPSSLTKMMT AYIVFGMLKS GRLKLDQMLP
VSEKAWRMQG SKMFVPLGQS IAVQDLIQGM VIQSGNDACI VLAEGVAGSE EQFVAQMNDM
AARIGLSNSH FMNATGWPAD NHYMSARDVA QLAVRLIRDF PEYYHFFSEK DYRFNKISQG
NRNVLVDKGL ADGLKTGHTD AGGFGLCASA DRGGNRVVLS LNGMPSSNAR AHEGERLLEW
SFANFENATL FRKGDIVEQA SVWLGTQPTV PLVATRDIVM TLPHGWRSRA HIGVDYQAPV
AAPVAAGQVL GDLVISNPGL ADIRMPLVAG QGVPRLGLFA RASAVLGQKL GRH