| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0006 |
|---|
| Symbol | |
|---|
| ID | 6973394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 7293 |
|---|
| End bp | 7973 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643389538 |
|---|
| Product | phosphoglycolate phosphatase |
|---|
| Protein accession | YP_002274423 |
|---|
| Protein GI | 209542194 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.537352 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.527818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCA CCCCCACGCC CCGCATCGCC GTGTTCGACA TGGACGGCAC CCTGCTGGAC
AGCCTGCCGG ACCTGGCGGC CAGCGCCGAC CGGCTGCTGA CCGGGTATGG CCTGCCCGGG
ATTTCGCCCG ACCTGGTTCG CGGCATGGTG GGGGACGGCG TGGCGGCCCT GGTGCGCCGC
CTTCTGGCCC ACGCCGGCAC GCCTGCGGCG GGAATCGACG TGCAGCAGGC CGTGGACCGC
TACATGGCGG ACTACACGCC GCGCGCGACC GAACAGTCGC GACCGTTCCC CGGCACCGAA
TATGCCCTGA AGACGCTGCG GGACGCGGGC TGGACCCTGG CCATCTGCAC CAACAAGCCG
GTGGCGGCGG CGCGGCGCAT CGTCAGTGAA CTGGGACTGA CGGAATGGTT CGACGCCATC
GGCGGCGGCG ATTCCTTCCC GGTCCGCAAG CCGGACCCCG CCCACCTGCT GGGCACGATC
GGGCTGGCCC ATGGCCATGC CGACCGCGCG ATCATGGTGG GCGACCATCA CAACGACATC
TTCGCGGCCA AGGGCGCCCA CGTGCGCTCG GTCTTCGCCC GGTGGGGCTA CGGCCGTCCG
GACATGGAAG CCGGCGCCAC GATCGGCGCC GATTCGATGA CCGAAATCCC CCACATCGCC
GGCCAGCTTA TCCCTGCATG A
|
|---|
| Protein sequence | MPATPTPRIA VFDMDGTLLD SLPDLAASAD RLLTGYGLPG ISPDLVRGMV GDGVAALVRR
LLAHAGTPAA GIDVQQAVDR YMADYTPRAT EQSRPFPGTE YALKTLRDAG WTLAICTNKP
VAAARRIVSE LGLTEWFDAI GGGDSFPVRK PDPAHLLGTI GLAHGHADRA IMVGDHHNDI
FAAKGAHVRS VFARWGYGRP DMEAGATIGA DSMTEIPHIA GQLIPA
|
|---|
| |