Gene Gbro_4609 details

Gene Information

• Locus tag: Gbro_4609
• ID: 8553991
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: -
• Start bp: 4940219
• End bp: 4942222
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 64%
• Product: oligopeptide transporter, OPT family
• Protein accession: YP_003275631
• Protein GI: 262204423

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.449466
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCACAT CAGGCATGAC CCCGATCGAA TCGTCCGGCC AGAAGAGCAT TCGGGAACTC 
ACCCTGCGGG GCGTGGTCCT CGGTGGCCTC ATCACCCTGG TGTTCACCGC CGCCAACGTC 
TACCTCGGCC TGCGGGTCGG CCTCACCTTT GCCACCGCGA TCCCCGCCGC CGTCATCTCG 
ATGGCGATCC TGCGCTACTT CGCCGACCAC TCGGTGGTGG AGAACAACAT CGTGCAGACC 
ATCGCGTCGG CGGCGGGTAC CTTGTCAGCG ATCGTGTTCA TCCTGCCCGG CCTGGTCATG 
GTGGGGTGGT GGAGCGGCTT TCCCTACTGG GTGACCGTGG CGGTGTGCGC GATCGGCGGC 
GTCCTTGGCG TCATGTACTC GATTCCGCTG CGCCGTGCGC TGGTCACCGG CTCCGACCTC 
CCGTATCCGG AAGGTGTTGC GGCGGCTGAG GTTCTGAAGG TCGGCGATTC GAGTGGCGGA 
GCCCGCGAGA ATCGTGCGGG CCTGCACGTG ATCATCGCCG GGTCCATCAT GTCGGCGGTG 
TTCTCGCTGC TGACCAAACT CAAGGTGGTC AGCGACAGCG TGTCCGGTGC GATCAAGATC 
GGCACCGGCG GAACGCTTTT CAATGCGGGT CTGCTGATGT CGCTGATCGG TATCGGTCAC 
CTCGTCGGTG TGTCGGTGGG CGTGGCGATG CTCGTCGGTC TCCTTATCTC CTTCGGGGTT 
CTGCTGCCGG TTCTCAGCCA GGGCAAACTC GAACCCGCAG ACTCCTTCTA CGACTCGGTC 
GACTCCTTCT TCGGCGGCGA TGTCCGCCTG GTCGGTGCCG GCGCCATCGC CATCGCCGCG 
CTGTGGGCGC TGGCCAAGAT CATCGTGCCC ATCATCCGTG GCATCAAATC CGCTCTGGCG 
TCGACGAAGT CGCGTCGAGA AGGGGTGAGT GTCGACGTCA CCGAGCGCGA TCTGCCGATG 
AACATCGTGG GCACCACGAT CCTCGTCCTG CTGATCCCGA TCGGTTTCAT GTTGTGGGAC 
TTCGTGCACG GCACCGTGCT CGGCGGCAGC GCCGGCGGCA TCATCGCCGT CAGCGTGGTG 
TTCATCTTCG TCATCGGTCT CGCGGTTGCC GCGGTCTGCG GTTACATGGC CGGTCTGATC 
GGCTCGTCCA ACAGTCCGAT CTCGGGTGTC GGCATCCTGG TGGTGCTCAT CGCCGCGATT 
CTCATCAAGT TGACCTACAG CGGTGCCGAC GCCGATCAGA CGTCCGCACT CGTGGCCTAC 
ACCCTGTTCA CCGCCGCCAT CGTGTTCGGC GTGGCGACCA TCTCCAACGA CAACCTGCAA 
GACCTCAAGA CCGGTCAGCT GGTCGGTGCC ACACCGTGGA AACAGCAGGT GGCCTTGATC 
ATCGGCGTGT TCTTCGGGTC GATCGTGATC CCGCCGATCC TCGGGCTGAT GTATGAGGCG 
TTCGGTTTCA AAGGCGCACC GGGCGCCACC GCGGACTCCC TGGCGGCACC GCAGGCGAGT 
CTGCTGTCCA CCCTCGCGAA GGGTGTGCTC GGCGACGACC TCAACTGGTG GCTCATCGGA 
CTCGGTGCAC TGATCGGCGT CGTAGTGATC GTCATCGACG AATCCATGGG CCGGATCACA 
CGCTTTCGGC TGCCGCCGCT GGCCGTCGGA ATGGGCATGT ATCTGCCGAT GTCGGTGACC 
TTGGTGATCC CCATCGGCGC CTTCCTCGGT CACTTCTACA ACCGCTGGGC CGAACACAGC 
GGCGGCAATG TGGAACACAA GAAGCGGATG GGCACCCTGG TGGCCACCGG TCTCATCGTC 
GGCGAGGCGC TCTTCGGAGT GGTGTTCGCC GGCATCGTGG CCGCCACCGG TGACGACTCG 
GTGCTCGCCG TCGTGGGTGA CGGCTTCGAG AAGTGGGCGC AGGCGCTCGG CGTGATCGTG 
TTCGTCGCGG CGATCGCCTG GCTCTACAAC TGGACCCGAA AGGTCGCCAC CCACAGCGGA 
TCGCCGGACC TGACGAAGAG CTGA 

 

Protein sequence

MSTSGMTPIE SSGQKSIREL TLRGVVLGGL ITLVFTAANV YLGLRVGLTF ATAIPAAVIS 
MAILRYFADH SVVENNIVQT IASAAGTLSA IVFILPGLVM VGWWSGFPYW VTVAVCAIGG 
VLGVMYSIPL RRALVTGSDL PYPEGVAAAE VLKVGDSSGG ARENRAGLHV IIAGSIMSAV 
FSLLTKLKVV SDSVSGAIKI GTGGTLFNAG LLMSLIGIGH LVGVSVGVAM LVGLLISFGV 
LLPVLSQGKL EPADSFYDSV DSFFGGDVRL VGAGAIAIAA LWALAKIIVP IIRGIKSALA 
STKSRREGVS VDVTERDLPM NIVGTTILVL LIPIGFMLWD FVHGTVLGGS AGGIIAVSVV 
FIFVIGLAVA AVCGYMAGLI GSSNSPISGV GILVVLIAAI LIKLTYSGAD ADQTSALVAY 
TLFTAAIVFG VATISNDNLQ DLKTGQLVGA TPWKQQVALI IGVFFGSIVI PPILGLMYEA 
FGFKGAPGAT ADSLAAPQAS LLSTLAKGVL GDDLNWWLIG LGALIGVVVI VIDESMGRIT 
RFRLPPLAVG MGMYLPMSVT LVIPIGAFLG HFYNRWAEHS GGNVEHKKRM GTLVATGLIV 
GEALFGVVFA GIVAATGDDS VLAVVGDGFE KWAQALGVIV FVAAIAWLYN WTRKVATHSG 
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