Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_4406 |
Symbol | |
ID | 8553788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 4713101 |
End bp | 4715023 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003275439 |
Protein GI | 262204231 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.601028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATGG AATCGGTCGC CTGGGACATG ATGTACAAGT CGTCGACCTC GCCGACGGAC CGCCGGCTTC GTCGCGACCG CCGGACGACG CTGCGCCGGA TCGGCGGATT CGCGCGGCCG CATCGTCGTC GGATCGCTGC GTTCCTGGTG TTGTCGGTGT TCACCGCGGT CCTCACCGTC GTCACGCCGC TGCTGGCCGG GCGGGTGGTC AACCTGATCA CCGGTGGCGG CTCCGACGCC GGAGCCGCGA TCGTCGGCCT CGCCGCACTG ATCGCGTTCA TCGCCGTCGC GGAGGCCGCG GTGTCGGTGG TGGTGCGGTG GTTGTCGTCG ACCATCGGTG AGGGTCTGAT CCTGGACCTG CGCCGCGCCG TCTTCGACCA CGTCCAGCGG ATGCCGGTCG CCTTCTTCAC CCGCACCCGC ACCGGCGCGC TGGTGAGCCG CCTCAACAAC GACGTCATCG GCGCGCAGCG CGCCTTCAGC GACACCCTGT CCGGGGTGGT GTCCAACATC GTCACGCTGG CGCTGACGCT GGGCGTGATG ATCGCGATCA GCTGGGAGGT GACCATCCTG GCGTTGATTC TGTTGCCTGT CTTCGTGATT CCGGCCCGGC GGATGGGGCG GCGGATGGCT GCCCTGTCCC GCGAGGCCGC CGAGCACAAT GCGCGGATGT CGACCCAGAT GACCGAGCGG TTCTCCGCAC CGGGTGCCAC CCTGGTGAAA CTGTTCGGGC GCCCCGAGGT CGAGTCCGCC GAGTTCTCCG GCCGCGCGGA TCGGGTGCGC GACATCGGGG TTCGGCGCGC CATGCTGCAG ACGGTGTTCA TGACCGCCCT GACGCTGGTG TCGGCGCTCG CCCTCGCGCT GGTGTACGGC CTCGGCGGCT GGCTGGCGAT CCATCAGCAT CTTTCGGCCG GAGCCGTTGT CTCCCTGGCG CTGTTGCTCA CCCGCATGTA TGCGCCGCTG ACCGCGCTGG CCAACGCCCG CGTCGAAATC ATGAGTGCCC TGGTCAGTTT CGAGCGGGTC TTCGAGGTGC TCGACCTCGA GCCACTGGTC GCCGAGAAGC CCGACGCGCG ACCGGTACCG CTCGCCGACA GCGGATCGGT CGCGGTCCGC ATGTCCGACG TGTCCTTTGC CTACCCGTCG GCCGACAAGG TGTCGCTGGC ATCGCTGGAA GAGGTTGCGC AGCTGGATAA CCGGGGTGGC GAGACGATTC TGCATCGCGT CGATCTCGAG GTCGCACCCG GCAAGATGCT CGCCCTGGTG GGCAGTTCCG GGGCCGGTAA GTCGACGATC GCCGGGCTGG TGACGCGGCT CTACGACGTC GACGACGGGT CGGTGCAACT CAACGGCGTC GACGTCCGCG ATCTCCGGCT CGACTCGCTA CACCGCACGG TCGGTCTCGT CACGCAGGAC GGTCACCTAT TCCACGACAC GATCCGCGCG AATCTCGCTC TGGCGCAACC CGATGCCGAT GATGAGGCGA TCTGGGACGC GCTACGGCGG GCCCGGCTGG CCGATCTCGT CGGATCACTG CCCGAGGGAC TCGACACCGT CGTCGGGGAA CGCGGTTACC GGCTCTCCGG TGGCGAACGC CAGCGCATGA CCATTGCGCG CCTGCTACTC GCACAGCCGG CCGTGGTGAT CCTCGACGAG GCCACCGCAC ACCTGGACTC GACGTCGGAA GCGGCGGTGC AGGAAGCACT TTCCGAGGCA CTGGCCGGTC GCACATCGAT CGTCATCGCA CACCGGCTCT CGACCATTCG GGCGGCCGAC GAGATCGTGG TACTCGAATC CGGGCGCGTC GTCGAACGCG GGGACCACGC AGCGCTTCTC GCCCGCGGTG GGCGCTACGC GGAGTTGTAT CGGACCCAGT TCGCCGACGA CAGTGCGACG GTGACGTGCT GTGGCGAGTC GATGAGTGCG TGA
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Protein sequence | MSMESVAWDM MYKSSTSPTD RRLRRDRRTT LRRIGGFARP HRRRIAAFLV LSVFTAVLTV VTPLLAGRVV NLITGGGSDA GAAIVGLAAL IAFIAVAEAA VSVVVRWLSS TIGEGLILDL RRAVFDHVQR MPVAFFTRTR TGALVSRLNN DVIGAQRAFS DTLSGVVSNI VTLALTLGVM IAISWEVTIL ALILLPVFVI PARRMGRRMA ALSREAAEHN ARMSTQMTER FSAPGATLVK LFGRPEVESA EFSGRADRVR DIGVRRAMLQ TVFMTALTLV SALALALVYG LGGWLAIHQH LSAGAVVSLA LLLTRMYAPL TALANARVEI MSALVSFERV FEVLDLEPLV AEKPDARPVP LADSGSVAVR MSDVSFAYPS ADKVSLASLE EVAQLDNRGG ETILHRVDLE VAPGKMLALV GSSGAGKSTI AGLVTRLYDV DDGSVQLNGV DVRDLRLDSL HRTVGLVTQD GHLFHDTIRA NLALAQPDAD DEAIWDALRR ARLADLVGSL PEGLDTVVGE RGYRLSGGER QRMTIARLLL AQPAVVILDE ATAHLDSTSE AAVQEALSEA LAGRTSIVIA HRLSTIRAAD EIVVLESGRV VERGDHAALL ARGGRYAELY RTQFADDSAT VTCCGESMSA
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