Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_3886 |
Symbol | |
ID | 8553267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | - |
Start bp | 4177619 |
End bp | 4179283 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003274955 |
Protein GI | 262203747 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00540166 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCGAAG CGGGCCGGAA TACCGACGAG GCCACCTTGG CCTGCGCCGG TGAATCCGAC TTGGCCGCAG CCGCTTCGGT CTTCACGCGC GGTGAACGCC AACACATGGC GCGCAAGATT CTGGCCGCCT ATCACCTCGG GGTGAAAGTC TTCGACCGCG TCATGGCCGC CGACTACGAC CGCTACCGCA AAAAGATGCC CGACAAAGCC GCCGTCCGTG ACGTCGCCTG GCACTTCGCG GTCCCGCCGG CCACCGCCGG ACGCTGGATG GCATTGGGCG AACTACTGTC CTCACTACCC AAGATCCGGG CCGCATTCCT GGACGGAGAC CTCTCTGAAT CGCGGGCGTC GCTTCTTGCG CACGCCGTGA TCGCACTCGA CGAAACGCAA TACGGCGCGG CCGAGGACGC GGCCCTCGGC TACGCCGCCG AAGCCTCCAC CAACAGCGTG CTCGCCGAAC AGCTCGACGA AATGGTCATC GCGCTCGACC CCGACCGCGC CGAACAAGCC CGCCACGCGT ATGCCGCCCG CACCCAAGAC GTCCGGTTCC GCAAAGACCT GTATGGCCAG GTCAACATCT CGGCCACCCT CGACCTCGTC GATGCCCGGA CCCTGCAGGC GCGTATCAGT GCGCTGGTCG CGGTCTTCCT GTGCCGCAAC GATAAGCGCC CAGCCAGTCA GCAACGCGCC GATGCCCTGG TTGCGCTCAT TCATGACCGC ACCACCATGG ACTGCACCTG CGGCTCACCT GACTGCGCTG CCCCGGCCAA CCGACCACCT GCACCCGAAG AACCCGAACC AGGTGAACCG CAATCGCAGA CGCCCGGTGA CGAGGACGTC GCCGACGACG GTGTGGATAT CGATGCCGAC GTGGACGTCA TCACACCCAC CCTCGACGTC GATCCCGACG CACCCCAACC CGACGAGCCG ACCGAGCCCG AACCTGGCCC CGAGTCCGAG CCCGTGCCGT CGACCGAGGT CGCGCGGATG CCGGTGCGGG TGGTTGTCGA AGTGGTCACC GATGCCCTGA CCCTGGCTGG GATGACCGGG CAGATGGTGC CCTACATCAA GGGCTACGGC GTCATCACCC CGGTCCACGC CCGCGAACTC GCTACCGATG CCACCTGGCA AGGCATGTAC CGCGAAAGCC AACGCTTCGC CCACCGCACC GACCCCACCA CTCCCGAATC AACCAGCGGT CTGCTCCGTC CCGGGCGGCC GCGACAGGGC GGAACCATCA TCGTGCCCAC CCACCTCACC AGCACCGACG GCGGTGGCAC CGGCAGCATC GTCGTACGCT CACGCCCACC CAACCCGACC CCCATCGACA CCACCGGACA CGGTGGACTC CTCACACCAC CACCCGGGGC GTTGGTTTAC GCTCCTGCGG AGGCGTTGCG GCGCACCATC GCTCACACCG ACCACCACTG CCGCGGACCC TACTGCGGCC GACCCGTGGA TCAATGCCAC CTCGACCACA TCGTGCCGTT CAACCACGAC GATCCCCTCG CGGGTGGCTG GACCATCGCC GAGAACCTGC ACCCGCTGCG CATCCCGTGC CACGAATTCA AACACCTCGG TATCTGGATA CCCACCATGG CCACCGGCCG GGCGATCATC TGGCGACACG TCGACTCCGG CAAGATCATC ATCACCTACC CCTGA
|
Protein sequence | MFEAGRNTDE ATLACAGESD LAAAASVFTR GERQHMARKI LAAYHLGVKV FDRVMAADYD RYRKKMPDKA AVRDVAWHFA VPPATAGRWM ALGELLSSLP KIRAAFLDGD LSESRASLLA HAVIALDETQ YGAAEDAALG YAAEASTNSV LAEQLDEMVI ALDPDRAEQA RHAYAARTQD VRFRKDLYGQ VNISATLDLV DARTLQARIS ALVAVFLCRN DKRPASQQRA DALVALIHDR TTMDCTCGSP DCAAPANRPP APEEPEPGEP QSQTPGDEDV ADDGVDIDAD VDVITPTLDV DPDAPQPDEP TEPEPGPESE PVPSTEVARM PVRVVVEVVT DALTLAGMTG QMVPYIKGYG VITPVHAREL ATDATWQGMY RESQRFAHRT DPTTPESTSG LLRPGRPRQG GTIIVPTHLT STDGGGTGSI VVRSRPPNPT PIDTTGHGGL LTPPPGALVY APAEALRRTI AHTDHHCRGP YCGRPVDQCH LDHIVPFNHD DPLAGGWTIA ENLHPLRIPC HEFKHLGIWI PTMATGRAII WRHVDSGKII ITYP
|
| |