| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_3500 |
|---|
| Symbol | |
|---|
| ID | 8552878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 3718274 |
|---|
| End bp | 3721633 |
|---|
| Gene Length | 3360 bp |
|---|
| Protein Length | 1119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_003274586 |
|---|
| Protein GI | 262203378 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.516923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGCG CGACATCGCT CGCCGCGGCG CTGGGCCTGC CCACCCCCAC CGCGGAACAG
GCCGCCGTCA TCGAGGGGCC GATCGAACCG ATGCTGGTGG TGGCCGGGGC GGGTGCGGGC
AAGACCGAGA CGATGGCCGC GCGCGTGGTG TGGCTGGTGG CCAATCAGCT CATCGGGCCC
GACGAGATCC TCGGCCTCAC CTTCACCCGC AAGGCGGCCA GCGAACTGGG CGCCCGCATC
CGGCGCCGGC TCTCGATGCT CTCCGGATCG CCGGCGCTAC GGTCCTGGGA CCCGGAGGGC
ACACTGGCAG CGCGACTTCG GGGTGCCGAC CCGGAGGTCA GCACCTATCA CGCCTACGCC
GGCCGGCTGA TCTCCGACTA CGGTTTGCTG CTTCCGGTCG AGCCCAATTC GACGTTGCTC
AGCGAGACCG AGCTCTGGCA GCTGGCGTTC TCCCTGGTCG CCAACTGGCC CGACGAACTG
CACACCACCA AGGTGCCCGC CAGTGTCACC GAGGCGGTGC TGAAGCTGTA CGGCGAGATG
GCCGAGCATC TCGTGGACAT CGACGACCTG GCCCGCGCCG GCAGCGACCT CTACGAGATG
ATCCCCACCC TCCCGAAGGG ACCCAAGCAG CGTGGCGGAC CCAATCAGGC GTTGTTGAAG
ATCCGTGACG TCATCGACGA ACGCCGGGAA CTCATCCCGA TGGTGACCGC ACTCGCCGAG
GCGATGCGCG AACAGTCGGC ACTGGACTTC GGCAGTCAGA TGTCACTGGC CGCCCGGTTG
GTGGTGGGCA ACCCGGAAGT TGTTGCTGCC GAACGCAAGG CGTTCCGCGC CGTCCTGCTC
GACGAATATC AGGACACCGG ACACTCCCAG CGGGTGCTGC TGTCGACGCT GTTCGGCGGT
ACGTCGCGCG ACGCACCGGT CGCGGTGACG GCGGTGGGGG ATCCCATCCA GTCGATCTAC
GGCTGGCGCG GGGCGTCGGC GGCCAACCTG CCGCGGTTCG CCGGTGACTT CCCAGCCGCC
GACGGCTCGC CCGCGGACCG GCGTGAACTG CTCACCAGCT GGCGTAATGC GGAGGTGGTG
TTGCGACTGG CCAACCATGT GTCGGCCGAG TTGCGTCGGC GCGGTATCCC GGTCAGTGTG
CTGCGCGCGC GGCCGGATGC GCCGAGCGGC TCCGCGCACA TCGCGCTCAC CGAGACGGTG
GTAGACGAGC GGGAATGGAT CGCTGACGCC ATCGAAACCC GTTGGCGCGC AGCCGAGAAT
GATGGTCAGG CGCCACCGAC CACGGCAATC CTGGTGCGCC GCAACGAGGA TTCGGCTCCG
TTGGCCGCCG AGCTGGAACG GCGCGGCATC CCCGCCGAGG TGGTCGGCAT CGGTGGTCTC
CTGCACGTCC CGGAGGTCAC CGATGTGGTC TCGACGCTGC GTCTGATGGC CGACCCGATG
GCCGGCACCG CCGCCATGCG GCTGCTCACC GGTGCCCGAT GGCGGCTCGG TGCAGCCGAT
CTCGCGGCGC TGTGGCGACG CGCCGCCGAA CTCGCCGCCG AGGAGATCGC CGCGGCCGGG
GGCGCGGTGA CCAGCCGTGA GCAGCTCGAC GCCGCGCTCG ACGCGGTGCT GCCCACCGAG
GTCGTGGACC GGGCGGGTAT CGCCGACGCC GTGGTCGACC CGGGCGATCC GTCCCGTTAC
AGTCCCGACG GGTACGCGCG GATCCGCGCC TTCGGCGCCC AGCTGGAGTC GCTGCGGCGG
CGGATCGGTC AGCCGCTACC CGAACTGGTC GCCGACGTGG AGAACACGAT CGGCGTCGGT
GTGGAGGCCC AGATCCGCGC GCGGCGCATG CGCGGGGCCA TCACCGGCCG CGAACACCTC
GACGCCTTCG CCGAGTACGT CACCCGCTAC GCCGACCGTC GCGGCGCTGA TCTGCCCGGA
CTGCTGGCCT TCCTTGAGAC CGCGGAGACC ATCGAGAAGG GCCTCGAGCC CGGTCGCATC
GAGGTCGCCG AGCAACGGGT GCAGATCCTG ACGGTGCATG CCGCCAAAGG TCTCGAGTGG
GATGTCGTAG CCATTCCGCA TTTGTGCCAC AACATCTTTC CCGGTGGTAA GGCCGAGACC
ACGTGGCTCG GCAGCGCGCG GGAACTGCCC GGTGAACTAC GCGGTGACCT GGCGATCGCA
GCGGAGCAGG GCAGTGCCCA CCCGGAGGGA TATCCGGTGC TCGACCTGCA CGCCGTGACC
GACCGCAAGG AACTCGAGGA CACCATCGCG ACCTACAAGG AGGCGATCGC CGATCGTCGC
CTCGAGGAGG ACCGCCGGCT GCTCTACGTC GCGCTCACGC GGGCCCGTCA CGACCTGCTG
ATCTCGGCGC ACCACTGGTC GGAGTCGGGC GACAAACCGC GCGGCGGATC GGAATTCTTC
ACCGAACTGC TGACCGCGAT CAGCGACGCG GTCGACGACC CCACCGTCGA GTCCGGCGGT
CTCGTCGTCG ACGTGCTGGC CCCCGAGCCC GACGACGGCG CGCCCAACCC GCTGGCCGAA
CGCGTCCTCG CCGCGCCGTG GCCTGCGGAC CCGCTGGCCG GTCGTCGGGA CGGGGTCCGG
GCCGCCGCGG ATCTGGTCCT CGCGGAGATC GCCGCGCGCG ACGCCCCGGC CCTCTTCGAC
ACCGACGGCG CGCCGGAGAG CGATGGCGAC CCAGACCTGT CCGACGAGAT CGCCGCGTGG
GAGGCCGAGG TGAGCGCCCT GCTCGTCGAG CGAGAGGCGA GCAATCAGGC GCTCGTGGAG
GTGGAGTTGC CGACGCATCT GTCGGTGAGT CAGCTCGTCG AACTCGACGC CGACGAAGCC
GAGTTCGCGC GGCGGTTGCG GCGTCCCACA CCTTTTCGGC CCAACCCGAC GGCGCGCCGC
GGTACGGCCT TCCACGCCTG GGTGGAGCGC TGGTTCGGCG CGACGCGGCT CCTCGACATC
GATGAATTGC CGGGCGCCGC GGACGCGACC GCCACCCCCG ACGCCGATCT CGACGCGCTG
CGCGATGCAT TCCTGGCGTC GCCGTGGGCC AACCGCAGTC CGAGCGAGGT GGAGGTGCCG
TTCGAGACGG TGATCGCCGG GATCGTGGTG CGCGGGCGCA TCGACGCCGT GTTCGCCGAC
CCCGACGGCG GGTGGACGGT GATCGACTGG AAGACCGGCG TGGTGCCCGA ACCCGCCCGG
CGCGAATCCC TGTTCATCCA GCTGGCCGCC TACCGCATCG CCTGGGCACA GCTCGCGGGC
GTGCCGGTCG ACCGGGTGCG TGCGGCGTTT CACTACGTGC GATCCGGACA CACCCTGGCC
GCGGACGAAC TGCCCGACGA GTCGGTACTC GCCGCAAAGC TCGCCCGCGC ACCGCAATGA
|
|---|
| Protein sequence | MISATSLAAA LGLPTPTAEQ AAVIEGPIEP MLVVAGAGAG KTETMAARVV WLVANQLIGP
DEILGLTFTR KAASELGARI RRRLSMLSGS PALRSWDPEG TLAARLRGAD PEVSTYHAYA
GRLISDYGLL LPVEPNSTLL SETELWQLAF SLVANWPDEL HTTKVPASVT EAVLKLYGEM
AEHLVDIDDL ARAGSDLYEM IPTLPKGPKQ RGGPNQALLK IRDVIDERRE LIPMVTALAE
AMREQSALDF GSQMSLAARL VVGNPEVVAA ERKAFRAVLL DEYQDTGHSQ RVLLSTLFGG
TSRDAPVAVT AVGDPIQSIY GWRGASAANL PRFAGDFPAA DGSPADRREL LTSWRNAEVV
LRLANHVSAE LRRRGIPVSV LRARPDAPSG SAHIALTETV VDEREWIADA IETRWRAAEN
DGQAPPTTAI LVRRNEDSAP LAAELERRGI PAEVVGIGGL LHVPEVTDVV STLRLMADPM
AGTAAMRLLT GARWRLGAAD LAALWRRAAE LAAEEIAAAG GAVTSREQLD AALDAVLPTE
VVDRAGIADA VVDPGDPSRY SPDGYARIRA FGAQLESLRR RIGQPLPELV ADVENTIGVG
VEAQIRARRM RGAITGREHL DAFAEYVTRY ADRRGADLPG LLAFLETAET IEKGLEPGRI
EVAEQRVQIL TVHAAKGLEW DVVAIPHLCH NIFPGGKAET TWLGSARELP GELRGDLAIA
AEQGSAHPEG YPVLDLHAVT DRKELEDTIA TYKEAIADRR LEEDRRLLYV ALTRARHDLL
ISAHHWSESG DKPRGGSEFF TELLTAISDA VDDPTVESGG LVVDVLAPEP DDGAPNPLAE
RVLAAPWPAD PLAGRRDGVR AAADLVLAEI AARDAPALFD TDGAPESDGD PDLSDEIAAW
EAEVSALLVE REASNQALVE VELPTHLSVS QLVELDADEA EFARRLRRPT PFRPNPTARR
GTAFHAWVER WFGATRLLDI DELPGAADAT ATPDADLDAL RDAFLASPWA NRSPSEVEVP
FETVIAGIVV RGRIDAVFAD PDGGWTVIDW KTGVVPEPAR RESLFIQLAA YRIAWAQLAG
VPVDRVRAAF HYVRSGHTLA ADELPDESVL AAKLARAPQ
|
|---|
| |