| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_2788 |
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| Symbol | |
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| ID | 8552152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gordonia bronchialis DSM 43247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013441 |
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| Strand | + |
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| Start bp | 2974332 |
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| End bp | 2976068 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_003273898 |
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| Protein GI | 262202690 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.987771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCA CCGTCGCAGA GATCATCGTC GAACGACTGA AGGACGCCGG GGTCGCCCGC
GTCTACGGCA TCCCCGGGGA CTCCCTCAAC GGCTTCACCG ACGCCCTGCG CGTCGACGGG
TCCATCCGAT GGCAACACGT CCGTCACGAA GAGGGCGCCG CCTTCGCGGC GACCGCCGAG
GCGTCCCTCA CCGGCGAGAT GGCGGTATGT GCGGGAAGTT GCGGTCCCGG CAATCTGCAT
CTGATCAACG GGCTCTTCGA CGCGCACCGC AGCCGGGTCC CGGTGCTCGC GATCGCCGCG
CACATCCCCG CCCCGGAGAT CGGGAGCGGG TACTTCCAGG AAACCCATCC CGAACAGCTG
TTCCGCGAGT GCAGTTCGTT CTGCGAGATG GTCAGCACAC CCGAACAGAT GCCGCGACTG
CTCGACGTCG CGATGCGCAC CGCCGTCGAA GAGCGCGGGG TGGCCGTTCT GGTGATCCCC
GGCGAGACCT TCCTGGCCAA ATGCTCCTCG CGACGCGCCG GTGCGCCAAT TCGCGCGGTC
GACCGGGTGG TGCGGCCCAC CGATGCCGAA CTCCGACGGG TCGCCGCCAC CCTCAACGCG
TCGGAGAAGG TGACGATCCT GGCCGGCGCC GGCACCGAAG GTGCACATGA CGAGGTCGTC
GAGCTGGCCA AGGCGTTGCA GGCCCCGGTG GTCCATGCCC TACGTGGAAA GGAGTTCGTC
GAATACGACA ATCCCTACGA CGTGGGGATG ACCGGTTTGC TCGGCTTTTC GTCGGGCTAT
CGGGCGATCG AGAAATGCGA CACCCTGCTC CTGTTGGGCA CCGATTTCCC CTACCAGCAG
TTCTATCCGT CCAAGGCGAC CATCATCCAG CTCGACATCC GCGGCGAACA GATCGGCCGG
CGCTGTCCGG TCGACATCCC GCTGGTCGGC AGCGTGCGCG ACACCATCCC ACCGCTACTG
GCGCTGATCG ACCGCAATCG CGATGTGTCG CACCTGGTCT CGTCTCGGGA TCACTACGCC
AAAGCCCGCG CGCGGCTCGA TGACCTGGCC GTCAACGATC GCAACCGCGC GCCCATCCAT
CCGCAGTATC TGGCCCGGCT CATCAGCGAC AAGGCGACCG ACGACGCAGT GTTCATCCCC
GACGTCGGCT CACCGGTCGT GTGGGCGGCC CGCTATCTGC GGATGACCGA ATCACGCAGG
CTCATCGGCT CTTTCACACA CGGCTCGATG GCCAACGCGG TCTCGCAGGC GGTGGGTGCG
CAATCGGCTT TCCCCGGTCG CCAGGTGATC GCGCTCGCCG GCGACGGCGG ACTGGCCATG
CTGCTCGGCG AACTGCTCAC CATCACGCAG AACGCGCTGC CGGTCAAGAT CGTCGTGTTC
AACAACTCCT CGCTCAACTT CGTCGAGGTG GAGATGAAGG CGGCCGGCTT CGTGAACTTC
GGAACCGACC TGATCAACCC CGACTTCGCG GCGCTGGCCC AGGCAGTCGG CATCCTCGGG
CGCCGCGTCG AAGAACCCGA TCGGCTCGAG CAGGCGGTCG GCGAGATTCT CGCGCATGAC
GGTCCGGCAC TCCTCGACGT GGTGACCGCC CGGCAGGAAC TGTCGATCCC GCCCACCATC
ACCGCCGCTC AGGCCAAGGG CTTCACCCTC TACGCGCTGC GCACCGTCAT GTCGGGCCGC
GGCGACGAAC TCGTGGACCT CGCCGACACC AACCTGTTCC GGCGCCTGTT CGACTGA
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| Protein sequence | MATTVAEIIV ERLKDAGVAR VYGIPGDSLN GFTDALRVDG SIRWQHVRHE EGAAFAATAE
ASLTGEMAVC AGSCGPGNLH LINGLFDAHR SRVPVLAIAA HIPAPEIGSG YFQETHPEQL
FRECSSFCEM VSTPEQMPRL LDVAMRTAVE ERGVAVLVIP GETFLAKCSS RRAGAPIRAV
DRVVRPTDAE LRRVAATLNA SEKVTILAGA GTEGAHDEVV ELAKALQAPV VHALRGKEFV
EYDNPYDVGM TGLLGFSSGY RAIEKCDTLL LLGTDFPYQQ FYPSKATIIQ LDIRGEQIGR
RCPVDIPLVG SVRDTIPPLL ALIDRNRDVS HLVSSRDHYA KARARLDDLA VNDRNRAPIH
PQYLARLISD KATDDAVFIP DVGSPVVWAA RYLRMTESRR LIGSFTHGSM ANAVSQAVGA
QSAFPGRQVI ALAGDGGLAM LLGELLTITQ NALPVKIVVF NNSSLNFVEV EMKAAGFVNF
GTDLINPDFA ALAQAVGILG RRVEEPDRLE QAVGEILAHD GPALLDVVTA RQELSIPPTI
TAAQAKGFTL YALRTVMSGR GDELVDLADT NLFRRLFD
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