| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_1200 |
|---|
| Symbol | |
|---|
| ID | 8550545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 1254825 |
|---|
| End bp | 1256537 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | histidine kinase HAMP region domain protein |
|---|
| Protein accession | YP_003272395 |
|---|
| Protein GI | 262201187 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.265792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGGA CGCGCCGGCA ACGCGCTCGT GGGCTGTTCG CGCGCCTGCG GCGTCGGCGC
GACTCGCTGG CGTGGAGCCT GGAGAAGGTG TCGACGCCCC GGGGCTGGGC GCGCATCGGC
CCGGTCATGC GGGCGCGAAT CGCCCGCTAC GCGATGGTCG TGGCGGTCCT CGCGATCGTC
GGCAGCAACG CCCTGATCGG GCTCGAGACC TTCCTGCTCG TTCAGGTCGC CTACAACGGT
GGTCAGCTGA CCTTTGCCAC CACGCTGGGT GCGCCGAACT TCCCGGCGGT CATCTTCGCG
GTCATCGTCG GCATCGTGAT CAACGTGCTG CTCGGCGTCC TGGTGCTGCG GCCGCATCTA
CGGTGGTTCG TCAGTTGTGC GCCCGCCGAT CACGAACGAC GCCGGGCGGT TCAGCGGATT
CCGCGTCATC AGGTCTTCGG GACGATGATC GCGTGGAGCG CCGCGGTCAT CGGTTATGTC
CTGGCCGCCG ACGACCTCAC CGGCAACACG GTCGTCGGCG TGGCGGTGGC CTTCACCCTG
GCCGGACTGT CCAGCGGCTG CCTCACCTAC CTGTTCGCCG AACGCGCGGC GCGTCCGATG
GCAGTGGCCG CACTCCACGA CGTCCCGACG ACGCGCGTCA TGCACGGAGT GCGCGGGCGC
ATGATCGCCG TGTGGGCGGT GAGCTCGGCG GTCCCGATGA TCGGGTTGCT CATCGTCAAC
GGCGGGCGCT GGGCCGACAT GCTGCCGCCC GTCGAGGGGC AGGTCGATTG GGCGACCGTC
GTGCTCGCCT TCGTCGGCCT CGCGGCCGGC GCCCGTGTCA TCTTTCTTGT CGGACAAGCG
ATCACCGATC CGCTCACCGA ACTGCGCAGG GCCGTCGAAC GCGTCGACGA CGGGCAACTC
GAAGCCCGGG TGCCGGTCTA CGATTCGTCG GAACTCGGTG TGCTCCAACA CGGTTTCAAC
GAGATGGTGG AAGGGCTCGC CGAGCGCGAG CGGATGCGGG AGATCTTCGC CCGCCACGTC
GGTGACACCG TCGCCGACCT CGCGATGGAG CGCGGCGCCG GTCTGCACGG CACCAACGCC
CACGTCGGGG TCCTGTTCGT CGACATCGTC GGTTCGACGG CGCTCGCCCA GGAGCAAGGG
CCGGATCGGA CTGCGGCGCT GCTGAATTCG TTCTTCGAGA TCGTCGCCGA CGTGGTCGAT
CACCACTCCG GGTTCGTGAA CAAGTTCGAG GGCGATGCCG CGCTGGCCGT CTTCGGCGCA
CCGGTGAACC TCGCGAATCC GGCGGCATCG GCACTCGCTG CGGCCCGTGA CCTCGCCGAC
CGGCTCACCG AAGGACTCGA CATCGGGTGG GGGATCGGGG TGTCCTACGG TGAGGCCTTC
GCCGGCAACA TCGGTGCCGA ACGCCGCTAC GAGTACACCG TGATCGGCGA TCCGGTCAAT
GAGTGTGCTC GCCTGTCCGA CATGGCCAAG ACCGGGCGGA TCACCGTGCT CGCCAGCGGT
TCGGCGGTGC ATGCCGCGGG CAGCGAAGCG CATGAGTGGC AGCTGCTGGG GACGCGGATC
GTGCGCGGCC GGACCGAGCC CACCCAGCTC TTCGCACCCG TCGATGTGGT GGCGCGAGCG
CCGTCGGAGG GTCTCCTGTC CGGGTTGTTC AAACCCGCGC GGCGGATGGT CGGCAACCCG
TTGCGCCTGC CGCTCAACAT GATCGGGTGG TGA
|
|---|
| Protein sequence | MVRTRRQRAR GLFARLRRRR DSLAWSLEKV STPRGWARIG PVMRARIARY AMVVAVLAIV
GSNALIGLET FLLVQVAYNG GQLTFATTLG APNFPAVIFA VIVGIVINVL LGVLVLRPHL
RWFVSCAPAD HERRRAVQRI PRHQVFGTMI AWSAAVIGYV LAADDLTGNT VVGVAVAFTL
AGLSSGCLTY LFAERAARPM AVAALHDVPT TRVMHGVRGR MIAVWAVSSA VPMIGLLIVN
GGRWADMLPP VEGQVDWATV VLAFVGLAAG ARVIFLVGQA ITDPLTELRR AVERVDDGQL
EARVPVYDSS ELGVLQHGFN EMVEGLAERE RMREIFARHV GDTVADLAME RGAGLHGTNA
HVGVLFVDIV GSTALAQEQG PDRTAALLNS FFEIVADVVD HHSGFVNKFE GDAALAVFGA
PVNLANPAAS ALAAARDLAD RLTEGLDIGW GIGVSYGEAF AGNIGAERRY EYTVIGDPVN
ECARLSDMAK TGRITVLASG SAVHAAGSEA HEWQLLGTRI VRGRTEPTQL FAPVDVVARA
PSEGLLSGLF KPARRMVGNP LRLPLNMIGW
|
|---|
| |