Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_4036 |
Symbol | |
ID | 6780899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4584379 |
End bp | 4586175 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642770029 |
Product | flavocytochrome c |
Protein accession | YP_002140822 |
Protein GI | 197120395 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCA AAAATATGGC AAACGCACTG CTTCTCTCGG CAGCCCTCAC GATCGCGGCC TCGGTAGCCT GGGGCGCGGA GGGGTCGAAG GGCGCCTTTC TGGCCGGCAT GCATAAGAAT AACCAAATAG CCTGCGCCGA TTGCCACGGG AAATCTCTTG CGGTCGACGA CAACGAAACC GCCCTGAACA AGAACTGCAA GGGTTGCCAT GGCGGCTTCA AGGATCTGGC GGCCAAGACC AAGGAGCACA TCAACCCGCA CGCCTCGCAC CTGGGGGATA CCAACTGCAC CGTCTGCCAT AAGGGGCATG TAGCCTCCAA GGCATACTGC AACTACTGCC ACAGCTTCGC CATGAAGATC CCCGCCATGG GGAGCGAGAA GGAGTCGAGC GACAAGAAAT GGGTGCAGGA AACAACCCGG GAGAAAAAGG ACCTGAAATC GGTGCGGACC GAATCGGCCG ACGTGGTCGT GATCGGTGCC GGCGGCTCGG GTTACGTCGC TTCCATAAGC GCCCATGACG CAGGGGCCAA GGTTATCCTT TTGGAGAAGA TGCCCATAAC CGGCGGCAAC AGCATGCTGG CCGCCGGCGG GATCAACGCC GCGAGGACCC GGTACCAGGA GAGGCTCGGG ATGCACGACG ACCCGGCCGA GATGGTGAAG GAGACCATGA AGGGGGGCAA GGACAAGAAC GATCCCGAAC TGGTGAAGGT GCTTGCCTAT AACTCTGCCG ACGCAGTGGA TTTCCTGGTT TCTCTGGGCG CGGACATGAC CGACCTGGTG CGCTCGGGGG GCGTCGCAGT GGACCGCACC CACCGTCCGG TGGGCGGGGC GGCAGTGGGG CCGCACCTGA TCAAGGTGTA CCGTGAGAAT GCAGCCAAGC GCAACCTCGA TGTCCGGGTC AACTCCGAGG TGGTGCAGAT ACTCTCCGAC GACAAGGGGC GCGTCACCGG CGTCCAGGTC AGGGGCAAGC ACAGCGGGGT TTACACCATC AAGGCCAAGG CGGTGATCGA CACGGCAGGC GGCTTTGCCG CGAACAACGA GCTGGTCGGC TTCTACAAGC CTCAGTTCAA GGAGACAGCT TCCTCGAATC AGCCGGGAGC TACCGGCGAG GGGGTCGCCC TGGCGGAAAA GATCGGCGCC AAGGTGATCG ACATGGAGCA GATCCAGATA CACCCGACCA TGGGAGGCGA GACCAAGGTC CTCATCTCCG AGACGGTGCG CGGAAGCGGA GCCATCTTGG TGAACCATGC CGGCAAGCGC TTCGTGAACG AGCTGACCAC CCGCGACAAG GCCTCCGCCG CCATCTTGGC GCAGCCTGAG AAATCGGCGT TCCTGGTGCT GGGCGAGGAT ATCCGTAAGA GCAACGTCCA GATAGACGGC TACATCGTCC TCGGCCTGGT GCAGGAGGCG GAGAGCGTTG CTGCGCTGGC GGCCAAGATG GGGGTCCCCG TCGACGCCCT GACCGCTACG GTGGACGCCT ACAACAAGGC CTTCGCCGCC AAGAAGGACC CTGAGTTCCA GCGCCAGGAT ATCCCCAGGC CGGTCAACGG ACCCAAGTAC TACGCAATCT GGGTCAAGCC GGGGCGCCAC CACACCATGG GCGGCGTGAA GATCAACACC GAGGCCCAGG TGATCGGCAA GGACGGTAAA CCGATGACCG GCTTCTACGC GGCGGGTGAA GTCACCGGCG GCGTGCACGG CTGGAACCGC CTGGGCGGCA ACGCCATCAC GGACACCGTG GTCTTTGGCA GGATCGCCGG CAACAACGCG GCACGCTTCG TCAAGGAAGC GAAGTAA
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Protein sequence | MKLKNMANAL LLSAALTIAA SVAWGAEGSK GAFLAGMHKN NQIACADCHG KSLAVDDNET ALNKNCKGCH GGFKDLAAKT KEHINPHASH LGDTNCTVCH KGHVASKAYC NYCHSFAMKI PAMGSEKESS DKKWVQETTR EKKDLKSVRT ESADVVVIGA GGSGYVASIS AHDAGAKVIL LEKMPITGGN SMLAAGGINA ARTRYQERLG MHDDPAEMVK ETMKGGKDKN DPELVKVLAY NSADAVDFLV SLGADMTDLV RSGGVAVDRT HRPVGGAAVG PHLIKVYREN AAKRNLDVRV NSEVVQILSD DKGRVTGVQV RGKHSGVYTI KAKAVIDTAG GFAANNELVG FYKPQFKETA SSNQPGATGE GVALAEKIGA KVIDMEQIQI HPTMGGETKV LISETVRGSG AILVNHAGKR FVNELTTRDK ASAAILAQPE KSAFLVLGED IRKSNVQIDG YIVLGLVQEA ESVAALAAKM GVPVDALTAT VDAYNKAFAA KKDPEFQRQD IPRPVNGPKY YAIWVKPGRH HTMGGVKINT EAQVIGKDGK PMTGFYAAGE VTGGVHGWNR LGGNAITDTV VFGRIAGNNA ARFVKEAK
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