| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_4012 |
|---|
| Symbol | |
|---|
| ID | 6780876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 4554897 |
|---|
| End bp | 4555883 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642770007 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002140800 |
|---|
| Protein GI | 197120373 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000045428 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCC TGCAGATCAG TTACCTGCTG GCCGCGTTGT CAGTCCCCGT GGTGCTGCAA
TTTCATCTCC TTCCCGCCGC GTTCGCCGGG CTTGCCGTGT ACGTGCTGAC CGCGAAGCTT
GCTCCCATGC TTCCGCTGCG CTGGGGGAGC CTGACCCAGA AGGTCGCCCT GGCAGGGATC
ATCCTGTTCG TCATCGCCCT GGTCTCCAGC ATCTGCCTCG GGCTCTGGTC GTTTTTGCGC
GGCCACCACG GGATGGCGAA CCTGCTCAAC ATGGCGGCCG AGACCCTGGA AAACCTGAAG
CGGACCCTCC CGGAGGATCT CACCGCGGCG CTTCCCGACA CCGTCGACGA ACTGCGCGAA
CAGATAACCA ACATGCTGCG AGAGCACGGG AAGAACATCT CCTCCGTCGG CATCTCCGGA
GTCAAGACCT TCGCCCACCT CATCCTCGGC ATGGTGGTGG GAAGCCTCGC GGTGCTGCAC
CGCTTCAACA AGGAAAACGG GTTCCCCCCC CTGGCCTCCG ACCTGCACGC GAGGCTGATC
AACCTGGCCG ATTCCTTCGA CAAGGTGGTC TTCGCCCAGG TGAAGATTTC CGCGCTCAAT
ACCGTTCTCA CCGCGATCTA CCTCGCCGTG GTGCTCCCCA TCTTCGGGGT CTACCTCCCC
ATGGTCACCC TCCTGGTCCT CCTCACCTTC GTGGCCGGCC TGCTGCCGGT GGTGGGGAAC
CTCATCTCCA ACTTCACCAT CGTGCTGATC AGCCTCGGCG TCTCCCCGAT GGTCGGTATC
GCCTCGCTGG CGTTCCTGAT CGTGATCCAC AAGCTGGAGT ACTTCACCAA CGCGAGGATC
GTGGGGGGCC AAGTCAAGGC CAGCGTCTGG GAGCTTTTGT GCGCCATGCT CTTCATGGAA
GCGATCTTCG GCATGGCCGG CCTGGTGGCG GCCCCCGTGG TTTATGCCTG GCTCAAGACC
GAGCTCAAGG CGAAGCGGCT GGTATAA
|
|---|
| Protein sequence | MNTLQISYLL AALSVPVVLQ FHLLPAAFAG LAVYVLTAKL APMLPLRWGS LTQKVALAGI
ILFVIALVSS ICLGLWSFLR GHHGMANLLN MAAETLENLK RTLPEDLTAA LPDTVDELRE
QITNMLREHG KNISSVGISG VKTFAHLILG MVVGSLAVLH RFNKENGFPP LASDLHARLI
NLADSFDKVV FAQVKISALN TVLTAIYLAV VLPIFGVYLP MVTLLVLLTF VAGLLPVVGN
LISNFTIVLI SLGVSPMVGI ASLAFLIVIH KLEYFTNARI VGGQVKASVW ELLCAMLFME
AIFGMAGLVA APVVYAWLKT ELKAKRLV
|
|---|
| |