Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_4002 |
Symbol | |
ID | 6780866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 4540417 |
End bp | 4542714 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769997 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_002140790 |
Protein GI | 197120363 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0248889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGCC GGAAGGGACA AAACCTCCTG GAGCAAGCAT TAACTATTGC CCAGGCCCCA GGTCGGTCCC ATCAGGTCCG CCTCAACAGC CTGCTTCGCC TGGCGGCCCG TTGGCATTCC CTCGCCTCGG CCACCATCTA TCTCCCCGAT CCCAAAGGGG TGGTGTTGCA GCGTCGCTTC AGCACGCTGG CCACCCCCTC CGGCCACAAC TGCCACATCC CTTACGGCGT GGGTCTCGCC GGGCGCACCG CCGCCACCCT TTCACCCCAA TCCGCCAGTG CCGACCTGCT TCATCCCGAC GAGCCCTGTT CCGGCAACGG CTCCATCGCT GCGCTCCCCC TTTTGGACGG GGACCGGCTC TTCGCCGTGC TGGCGCTGGA GAGCGGCGCC GCGGAAGTCG CCCGGGAAGC CGTCGACGCG GCCGGTACCC TGGCGCCCGT CTTCTCCCTG ACCGTAGCCC GCATGGCCGC AGCCGAAGAG GCTGAGGAGG CGCAGCGCAA CCTGTCGCTA CTTTCGGCGC TGGCCAAGCT CTTGAGCTCG CCGCAGCCGC GCGGGGTGCT GCTGCACCGG TTGATGCAGC TTTGCACCAG TTCCGGCCTC TCCAGTTGCG CCATCGTCCG CTTGAAGCAG AGGAATTCCG GCAAGGAGAG GGTGATCCGG AGCTGCCGCA GGGGAATGGG CGACAAGCTC CCCGACCTGC TGGAAAAAGA AGCTGCCCTG GCGGTCCATG TCTGCGCCAC CGAGACCACC TGCGCCGAGG AACTCGGAGA CGACTCCAGC TACCGGTACG CCCTCTGCAC CCCGCTGGGA AGCAACGGCG CGGCGCTGGG GACCATGACC CTCTTCGGGG GGCCCGAACT GACCGCGCCC AAGCAGATCG AGCTTGCCGA AACGGTCGCG CGACTTTTGT CCGGCGCCAT GGCCGAGGCG ATCTGCAAGG AGCAGATCAA GACCTACGAC AGCGAGAACG AGAAGAAGCT GAAAGAGCTG TCCCTTCTCT ACCGGATGAG CAACACCATG CTCTCCACCA TCCAGCTGAA CAAACTGATC CACCTCACCC TGACCGCGCT CACCTCGGGT CCCACCCCCT TCTTCGACCG GGCCATGCTC TTTCTCACCA ACGAGCGTTC CGGGATGTTG CTCGGCATGC TGGGGGTAAC GACGGAGACC TCCCCTTCCC TCTCCAGCCA AAACGGAGGG AGCGACGACC TCCTCTCCAG CCGGTGGGAC ATCTCCGATG AAGAGATGGC CGCCCAGCGC AACTCCGAAT TCTGCCGGCA GGTACAGGGG AGACGGCTTG AGCTGGACGG AACGCTCAAC ATCGCTTCCC AGGCCGTGCT GGAAAAGAGG CTGATCTACA TCCCCGAAGA AGGCGGCATC GGCGGCCCCC TCCATTCCCG GCGCAGCGCC CTGGCCGCCT CTCCGCTCAT CGCGCATGGG CAGGCCGTAG GGGCGGTACT GGTGGACAAC GCCCTCACCC ACAAGCCGAT CAACCAGGAG CACCTGCGTT TCCTGCAGCT CTTCACCAAC CAGGCGGGAA TGGCCATCGA GAACTCGATG CTCTACAACA AGATCGAGGA CGCGAACCAT CAGTTGAGCG AGGCGCAGGA GAACCTGCTC CAGAAGGAGC GGCTTGCCGC CATCGGCGAA ATGGCCGCCG GCATCGCACA CGAGTTGAAG GGGCCGCTGG TCTCCATCGG CGGCTTCGCC GGCAGGCTCG CCAGGAAACT CCCCCAGGAC ACCAGCGAGT GGGCCCATGC CGACCTGATC GTGCGCGAAG TGCTCCGGTT GGAGGGAATC CTCTCCGAGA TCCTGCTCTT TTCGAAGAAA ACCACCATCT GTTACACCCG GTGCGACCTC TCCGAGGTCG TGAAGGAGTC GCTCGCCGTG GTCACCCCTC CACTGGAGGA GAAGCAGATC AGCGTGAACG CCAAATTCCC GCGGCATAAG CTCTTGCTTT TGGGGGACGG ACAGCAGTTG AAGCAGGTGT TCATCAACAT CATCCTGAAC GCCCTCGATG CCATGGGGAC AGGGGGGGCG CTGAACATCC AGGTCTCGGC GGCCGAGATG GACGACAAGG AAGCCGTCCA GGTGAAGATA TCCGACACCG GCGGCGGCAT CCCGCTGGAG TCCTTGAACA GCATCTTCAC CCCCTTCTTC ACCACCAAAG GAAGCGGCAC CGGCTTGGGG CTCCCCATCG CCAACCGCAT CATCACCAAC CACGGCGGCA AGATCCAAGT CACCAACAAC CCCGGCCTCG GGGTCGAGTT CAGGGTCATC CTGCCCAAGC ACTGGTGA
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Protein sequence | MAGRKGQNLL EQALTIAQAP GRSHQVRLNS LLRLAARWHS LASATIYLPD PKGVVLQRRF STLATPSGHN CHIPYGVGLA GRTAATLSPQ SASADLLHPD EPCSGNGSIA ALPLLDGDRL FAVLALESGA AEVAREAVDA AGTLAPVFSL TVARMAAAEE AEEAQRNLSL LSALAKLLSS PQPRGVLLHR LMQLCTSSGL SSCAIVRLKQ RNSGKERVIR SCRRGMGDKL PDLLEKEAAL AVHVCATETT CAEELGDDSS YRYALCTPLG SNGAALGTMT LFGGPELTAP KQIELAETVA RLLSGAMAEA ICKEQIKTYD SENEKKLKEL SLLYRMSNTM LSTIQLNKLI HLTLTALTSG PTPFFDRAML FLTNERSGML LGMLGVTTET SPSLSSQNGG SDDLLSSRWD ISDEEMAAQR NSEFCRQVQG RRLELDGTLN IASQAVLEKR LIYIPEEGGI GGPLHSRRSA LAASPLIAHG QAVGAVLVDN ALTHKPINQE HLRFLQLFTN QAGMAIENSM LYNKIEDANH QLSEAQENLL QKERLAAIGE MAAGIAHELK GPLVSIGGFA GRLARKLPQD TSEWAHADLI VREVLRLEGI LSEILLFSKK TTICYTRCDL SEVVKESLAV VTPPLEEKQI SVNAKFPRHK LLLLGDGQQL KQVFINIILN ALDAMGTGGA LNIQVSAAEM DDKEAVQVKI SDTGGGIPLE SLNSIFTPFF TTKGSGTGLG LPIANRIITN HGGKIQVTNN PGLGVEFRVI LPKHW
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