| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3971 |
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| Symbol | |
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| ID | 6780835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4508385 |
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| End bp | 4510061 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642769966 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_002140759 |
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| Protein GI | 197120332 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.313503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAGAAA CCAGCACAGA GAGTACCGGG CTTAAGTTCG TAGCACTGGG AGGACTAGGA
GAAATCGGCC TTAACATGGC GGCCTTCGAG TACGGCGACG ACATCGTCAT CGTCGACTGC
GGGCTCATGT TCCCCGAGCC TTACATGCTG GGAATTGACG TGGTGATCCC CGACATTGGC
TACCTGATCG AGAGGGCGGA CCGCATCCGC GCCATCCTGC TCACCCACGG CCACGAGGAC
CACATCGGCG CGCTTCCCTA CGTGCTTAGG GATATCAATC CCCCCATCTA CGGGACGGCG
CTGACACTGG GCTTCGTGAA GGAAAAGCTC AAGGAATTCG AGCTGGATCA AAAGGTCGAC
CTGAGGGTGG TCAAGCCGCG GGACACGGTG CAGCTCGGCT CTTTCGAGGT CGAGTTCATC
CGGGTCGCAC ATTCCATCGT CGACGGCTGC GCCCTGGCCC TAAGCTGCCC GGAAGGGGTG
GTGATACACA CCGGCGACTT CAAGCTGGAC CAGACACCGG TCGACGGCGA ACTGACCGAT
CTCGCGACCT TCTCCCGCTA CGGCGAGAAG GGGGTGCTCG CGCTCTTCGC GGACTCGACC
AACATCGAGC GCGAGGGGTA CACGCTTTCC GAACGGCTGG TGGGGGATGC TTTCGAGGAG
ATCTTCCCGG CCTGCGCCGG CAGGGTCATC GTCGCCGCCT TCTCCAGCAA CATCCACCGT
GTGCAGCAGG TGGTGCGCGC GGCGGAGAAA AGCGGCAGGA AGGTGCTTTT GAACGGCCGC
TCCATGATCG GCAACGTGCA GATCGCGCGC GAACTGGGCT ACCTGAAGAT CCCGGACGAC
ATACTGATCG ACCTGAAGGA GCTCCCCAGG CTCCCGAAGG AACAGGTCTG CATGATCACC
ACCGGGAGCC AGGGGGAACC CAGAAGTTCG CTGATCCGGA TTGCCATGGA CGACCACAAG
CAGATCAAGC TGGAGCGCGG GGATACGGTC ATCCTCTCCT CCCGCTTTAT CCCGGGCAAC
GAAAAGACCA TTTCGGACCT GATGAACCAC CTGTACCGGC GCGGCGCCGA GGTGATTCAC
GAGAAGGTTT CCGAGGTCCA CGTCTCCGGC CACGCGAGCC AGGAGGAGTT GAAGCTCCTG
CACAACCTGG TGAAGCCGCG CTTCTTCGTC CCGGTGCACG GCGAGTACCG GCACCTGGTT
AAGCACTCCC AACTGGCCCA GAAGGTCGGC ACCCCCGAGG AGCGCTGCAT CCTCGCGGTC
AACGGCGACG TCATCCTCTT TGCCGGGGAC GAGGCGTGCA TCGTGGACCA GGTCAGCACC
GGCCGCGTCT TCGTGGACGG CAAAGGGGTA GGGGACGTCG GCAACGTAGT GCTTAAGGAT
AGGAAGCATC TCTCCGAAGA TGGAATGGTG GTGGTCATCA TCGGCATCAA CCAGACCACC
GGCGAGATCA TCTACGGCCC CGACATCGTT TCACGCGGCT TCGTCTTCGA GGACGATAGC
CAGGAGTATC TGGAAGAGGC GAAGAAGGTC GTGCTCGACA CGCTGGCCTT GGTCACCCCC
GAGGTGATGA CAGACTGGAA CGAGGTGAAG CTGGAAGTGC GCCGCGTGCT GCGCCGGCTC
TTCAACAAGA CCCTGGAAAG GCGACCGGTG ATACTGCCGC TCGTGTTGGA GATGTGA
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| Protein sequence | MEETSTESTG LKFVALGGLG EIGLNMAAFE YGDDIVIVDC GLMFPEPYML GIDVVIPDIG
YLIERADRIR AILLTHGHED HIGALPYVLR DINPPIYGTA LTLGFVKEKL KEFELDQKVD
LRVVKPRDTV QLGSFEVEFI RVAHSIVDGC ALALSCPEGV VIHTGDFKLD QTPVDGELTD
LATFSRYGEK GVLALFADST NIEREGYTLS ERLVGDAFEE IFPACAGRVI VAAFSSNIHR
VQQVVRAAEK SGRKVLLNGR SMIGNVQIAR ELGYLKIPDD ILIDLKELPR LPKEQVCMIT
TGSQGEPRSS LIRIAMDDHK QIKLERGDTV ILSSRFIPGN EKTISDLMNH LYRRGAEVIH
EKVSEVHVSG HASQEELKLL HNLVKPRFFV PVHGEYRHLV KHSQLAQKVG TPEERCILAV
NGDVILFAGD EACIVDQVST GRVFVDGKGV GDVGNVVLKD RKHLSEDGMV VVIIGINQTT
GEIIYGPDIV SRGFVFEDDS QEYLEEAKKV VLDTLALVTP EVMTDWNEVK LEVRRVLRRL
FNKTLERRPV ILPLVLEM
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